YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221322007
Organism:	Bacillus subtilis subsp. subtilis str. SMY
Length:	227 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221322007.

Description	E-value	Query Range	Subject Range
gi\|170688380, gi... - gi\|170688380\|ref\|ZP_02879589.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|254756056 - gi\|254756056\|ref\|ZP_05208085.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|170708742, gi... - gi\|170708742\|ref\|ZP_02899179.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|254742280 - gi\|254742280\|ref\|ZP_05199966.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|177653658, gi... - gi\|177653658\|ref\|ZP_02935797.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|254739098 - gi\|254739098\|ref\|ZP_05196800.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|190567477, gi... - gi\|190567477\|ref\|ZP_03020390.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis Tsi... gi\|254724753 - gi\|254724753\|ref\|ZP_05186536.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|195992787, gi... - gi\|196034744\|ref\|ZP_03102152.1\| phosphoribosylformylglycinamidine synthase I [Bacillus cereus W], gi... gi\|254686677 - gi\|254686677\|ref\|ZP_05150535.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|206974165, gi... - gi\|206974165\|ref\|ZP_03235082.1\| phosphoribosylformylglycinamidine synthase I [Bacillus cereus H3081.... PURQ_BACAA - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus anthracis (strain A0248) GN=purQ... PURQ_BACC7 - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus cereus (strain AH187) GN=purQ PE... PURQ_BACAC - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus anthracis (strain CDC 684 / NRRL... PURQ_BACC0 - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus cereus (strain AH820) GN=purQ PE... gi\|164712848, gi... - gi\|165871364\|ref\|ZP_02216012.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|167530464, gi... - gi\|167634150\|ref\|ZP_02392472.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|167640124, gi... - gi\|167640124\|ref\|ZP_02398391.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str... gi\|49177235, gi\|... - gi\|49183308\|ref\|YP_026560.1\| phosphoribosylformylglycinamidine synthase subunit I [Bacillus anthraci... gi\|47500704, gi\|... - gi\|47525556\|ref\|YP_016905.1\| phosphoribosylformylglycinamidine synthase subunit I [Bacillus anthraci... PURQ_BACC1 - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus cereus (strain ATCC 10987 / NRS ... gi\|30253834, gi\|... - gi\|30260466\|ref\|NP_842843.1\| phosphoribosylformylglycinamidine synthase subunit I [Bacillus anthraci... PURQ_BACHK - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus thuringiensis subsp. konkukian (... gi\|65317718, gi\|... - gi\|65317718\|ref\|ZP_00390677.1\| COG0047: Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine... PURQ_BACHK - Phosphoribosylformylglycinamidine synthase 1 OS=Bacillus thuringiensis subsp. konkukian GN=purQ PE=3... PURQ_BACAN - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus anthracis GN=purQ PE=3 SV=1 gi\|254761873 - gi\|254761873\|ref\|ZP_05213722.1\| phosphoribosylformylglycinamidine synthase I [Bacillus anthracis str...	226.0	[0..1]	[227..1]

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Predicted Domain #1

Region A:
Residues: [1-227]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAVIVLPG SNCDIDMYHA VKDELGHEVE YVWHEETSLD GFDGVLIPGG FSYGDYLRCG  60
   61 AIARFANIMP AVKQAAAEGK PVLGVCNGFQ ILQELGLLPG AMRRNKDLKF ICRPVELIVQ 120
  121 NDETLFTASY EKGESITIPV AHGEGNFYCD DETLATLKEN NQIAFTYGSN INGSVSDIAG 180
  181 VVNEKGNVLG MMPHPERAVD ELLGSADGLK LFQSIVKNWR ETHVTTA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	36.39794
Match:	1t3tA
Description:	Structure of Formylglycinamide synthetase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
carbon-nitrogen ligase activity, with glutamine as amido-N-donor	3.1043669360156	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	2.56186360117064	bayes_pls_golite062009
phosphoribosylformylglycinamidine synthase activity	2.11687258439612	bayes_pls_golite062009
catalytic activity	1.67435536171189	bayes_pls_golite062009
carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	0.93238515268938	bayes_pls_golite062009
carbamoyl-phosphate synthase activity	0.91202213061505	bayes_pls_golite062009
ligase activity	0.47575409275683	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: