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View Structure Prediction Details

Protein: gi|221315780
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 243 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221315780.

Description E-value Query
Range
Subject
Range
gi|89202896, gi|... - gi|89202896|ref|ZP_01181601.1| regulatory protein GntR, HTH:UbiC transcription regulator-associated ...
225.0 [0..1] [242..1]

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Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNINKQSPIP IYYQIMEQLK TQIKNGELQP DMPLPSEREY AEQFGISRMT VRQALSNLVN  60
   61 EGLLYRLKGR GTFVSKPKME QALQGLTSFT EDMKSRGMTP GSRLIDYQLI DSTEELAAIL 120
  121 GCGHPSSIHK ITRVRLANDI PMAIESSHIP FELAGELNES HFQSSIYDHI ERYNSIPISR 180
  181 AKQELEPSAA TTEEANILGI QKGAPVLLIK RTTYLQNGTA FEHAKSVYRG DRYTFVHYMD 240
  241 RLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.154902
Match: 2ra5A
Description: No description for 2ra5A was found.

Predicted functions:

Term Confidence Notes
transcription regulator activity 3.67337973971815 bayes_pls_golite062009
DNA binding 2.4285792703914 bayes_pls_golite062009
transcription factor activity 2.41410286768641 bayes_pls_golite062009
nucleic acid binding 2.36311807645798 bayes_pls_golite062009
binding 1.53283393165662 bayes_pls_golite062009
catalytic activity 0.43947186099223 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle