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View Structure Prediction Details

Protein: gi|221320672
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 473 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221320672.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
255.0 [0..4] [418..1883]

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Predicted Domain #1
Region A:
Residues: [1-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSLITLGL ASVIGTSSFL IPFTSKTASA ETLDEKKQKI ESKQSEVASS IEAKEKELTE  60
   61 LQENQSKIEK ELKDINDKAL DTSNKIEDKK EENDKTKEEI KKLKKEIKET EARIEKRNEI 120
  121 LKKRVRSLQE SGGSQGYIDV LLGSTSFGDF ISRATAVSSI VDADKDLIKQ QEQDKAKLED 180
  181 SEADLNDKLK EVQAALAKLE TMQKDLDKQL NEKDKLFDEA KASQKKTAKA ISELKSEASE 240
  241 LANQKANTEA EQARIKKEQE AAAALIKKQE EAQKASDETQ TDDSQTATTE SSKASSSDDS 300
  301 SDNSSDNSSN GSSNSSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.39794
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [318-473]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGSSSKKSSG SNSNSGGTVI SNSGGIEGAI SVGSSIVGQS PYKFGGGRTQ SDINNRIFDC  60
   61 SSFVRWAYAS AGVNLGPVGG TTTDTLVGRG QAVSASEMKR GDLVFFDTYK TNGHVGIYLG 120
  121 NGTFLNDNTS HGVSVDSMSN PYWKAAFKGV VRRVVQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.39794
Match: 2hbwA
Description: No description for 2hbwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle