| Protein: | gi|168278889 |
| Organism: | synthetic construct |
| Length: | 672 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|168278889.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..672] | [1..672] |
|
|
0.0 | [1..672] | [6..677] |
|
|
0.0 | [1..672] | [1..672] |
|
|
0.0 | [1..672] | [1..675] |
|
|
0.0 | [1..672] | [1..672] |
|
|
0.0 | [5..668] | [7..674] |
|
|
0.0 | [7..635] | [47..685] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MTPSQVAFEI RGTLLPGEVF AICGSCDALG NWNPQNAVAL LPENDTGESM LWKATIVLSR 60
61 GVSVQYRYFK GYFLEPKTIG GPCQVIVHKW ETHLQPRSIT PLESEI
|
| Detection Method: |  |
| Confidence: | 30.69897 |
| Match: | 1ac0A |
| Description: | GLUCOAMYLASE, GRANULAR STARCH-BINDING DOMAIN COMPLEX WITH CYCLODEXTRIN, NMR, MINIMIZED AVERAGE STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [107-315] |
1 11 21 31 41 51
| | | | | |
1 IIDDGQFGIH NGVETLDSGW LTCQTEIRLR LHYSEKPPVS ITKKKLKKSR FRVKLTLEGL 60
61 EEDDDDRVSP TVLHKMSNSL EISLISDNEF KCRHSQPECG YGLQPDRWTE YSIQTMEPDN 120
121 LELIFDFFEE DLSEHVVQGD ALPGHVGTAC LLSSTIAESG KSAGILTLPI MSRNSRKTIG 180
181 KVRVDYIIIK PLPGYSCDMK SSFSKYWKP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [316-672] |
1 11 21 31 41 51
| | | | | |
1 RIPLDVGHRG AGNSTTTAQL AKVQENTIAS LRNAASHGAA FVEFDVHLSK DFVPVVYHDL 60
61 TCCLTMKKKF DADPVELFEI PVKELTFDQL QLLKLTHVTA LKSKDRKESV VQEENSFSEN 120
121 QPFPSLKMVL ESLPEDVGFN IEIKWICQQR DGMWDGNLST YFDMNLFLDI ILKTVLENSG 180
181 KRRIVFSSFD ADICTMVRQK QNKYPILFLT QGKSEIYPEL MDLRSRTTPI AMSFAQFENL 240
241 LGINVHTEDL LRNPSYIQEA KAKGLVIFCW GDDTNDPENR RKLKELGVNG LIYDRIYDWM 300
301 PEQPNIFQVE QLERLKQELP ELKSCLCPTV SRFVPSSLCG ESDIHVDANG IDNVENA
|
| Detection Method: | |
| Confidence: | 54.221849 |
| Match: | 1ydyA |
| Description: | Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.322782393124324 | bayes_pls_golite062009 |
| hydrolase activity | 0.114597543302679 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.10444517300189 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.0391669406455814 | bayes_pls_golite062009 |
| phosphoric diester hydrolase activity | 0.0229452028027644 | bayes_pls_golite062009 |
