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View Structure Prediction Details

Protein: gi|220946232, gi...
Organism: synthetic construct
Length: 538 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220946232, gi....

Description E-value Query
Range
Subject
Range
gi|21758435 - gi|21758435|dbj|BAC05305.1| unnamed protein product [Homo sapiens]
552.0 [0..1] [369..1]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPTINNSAV NSAAEKRPQR QTERKSEIIC RVKYGNNLPD IPFDLKFLQY PFDSHRFVQY  60
   61 NPTSLERNFK YDVLTEHDLG VTVDLINREL YQADSMTLLD PADEKLLEEE TLTPTDSVRS 120
  121 RQHSRTVSWL RKSEYISTEQ TRFQPQNLEN IEAKVGYNVK KSLREETLYL DREAQIKAIE 180
  181 KTFSDTKSEI T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [192-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHYSKPNVVP VEVLPIFPDF TNWKFPCAQV IFDSDPAPAG KNVPAQLEEM SQAMIRGVMD  60
   61 ESGEQFVAYF LPTEQTLEKR RTDFINGELY KEEEEYEYKI AREYNWNVKT KASKGYEENY 120
  121 FFVMRQDGIY YNELE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [327-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRVRLNKRRV KVGQQPNNTK LVVKHRPLDS MEHRMQRYRE RQLEVPGEEE EIVEEVREEE  60
   61 QMQIIGETEK TSEDAAVGAQ AASGADSPAQ VARDRQSRSR SRTRSGSSSG SGSGSGSRAS 120
  121 SRSKSGSRSG SGSRSRTNSP AGSQKSGSRS RSVSRSRSRS KSGSRSRSRS RSKSGSRSRS 180
  181 GSRSGSGSRS PSRSRSGSPS GSGSSSGSAS DE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.154902
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle