YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|220948950, gi...
Organism:	synthetic construct
Length:	191 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220948950, gi....

Description	E-value	Query Range	Subject Range
gi\|75823380, gi\|... - gi\|75823380\|ref\|ZP_00752886.1\| COG0127: Xanthosine triphosphate pyrophosphatase [Vibrio cholerae RC3... tr\|D7HDF9\|D7HDF9... - Non-canonical purine NTP pyrophosphatase OS=Vibrio cholerae RC385 GN=VCRC385_00307 PE=3 SV=1	266.0	[0..2]	[186..1]
gi\|75815260, gi\|... - gi\|75815260\|ref\|ZP_00745778.1\| COG0127: Xanthosine triphosphate pyrophosphatase [Vibrio cholerae V52... gi\|148876091, gi... - gi\|153828382\|ref\|ZP_01981049.1\| HAM1 family protein [Vibrio cholerae 623-39], gi\|148876091\|gb\|EDL742...	266.0	[0..2]	[186..1]
ITPA_ANOGA - Inosine triphosphate pyrophosphatase OS=Anopheles gambiae GN=AGAP008374 PE=3 SV=2 gi\|55237315, gi\|... - gi\|58389507\|ref\|XP_317079.2\| AGAP008374-PA [Anopheles gambiae str. PEST], gi\|55237315\|gb\|EAA12331.2\|...	266.0	[0..1]	[188..1]
gi\|227116859, gi... - gi\|75825857\|ref\|ZP_00755292.1\| COG0127: Xanthosine triphosphate pyrophosphatase [Vibrio cholerae O39... gi\|153216270, gi... - gi\|153216270\|ref\|ZP_01950363.1\| HAM1 family protein [Vibrio cholerae 1587], gi\|124114359\|gb\|EAY33179...	265.0	[0..2]	[186..1]
NTPA_VIBCH - Non-canonical purine NTP pyrophosphatase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor ... HAM1_VIBCH, NTPA... - Non-canonical purine NTP pyrophosphatase OS=Vibrio cholerae GN=VC_0456 PE=3 SV=1, HAM1 protein homol... gi\|197751436, gi... - gi\|254291167\|ref\|ZP_04961963.1\| HAM1 family protein [Vibrio cholerae AM-19226], gi\|197751436\|ref\|YP_... gi\|126519303, gi... - gi\|229509070\|ref\|ZP_04398558.1\| nucleoside 5-triphosphatase RdgB (dHAPTP dITP XTP-specific) [Vibrio ... gi\|229344427, gi... - gi\|229519738\|ref\|ZP_04409181.1\| nucleoside 5-triphosphatase RdgB (dHAPTP dITP XTP-specific) [Vibrio ... gi\|229368905, gi... - gi\|229606250\|ref\|YP_002876898.1\| nucleoside 5-triphosphatase RdgB (dHAPTP dITP XTP-specific) [Vibrio... gi\|116189570, gi... - gi\|75829103\|ref\|ZP_00758420.1\| COG0127: Xanthosine triphosphate pyrophosphatase [Vibrio cholerae MO1...	264.0	[0..2]	[186..1]
gi\|116219733, gi... - gi\|75819188\|ref\|ZP_00749281.1\| COG0127: Xanthosine triphosphate pyrophosphatase [Vibrio cholerae V51...	261.0	[0..2]	[186..1]
gi\|54644268, gi\|... - gi\|54644268\|gb\|EAL33009.1\| GA21395-PA [Drosophila pseudoobscura], gi\|125984372\|ref\|XP_001355950.1\| G...	261.0	[0..1]	[187..1]
ITPA_MOUSE - Inosine triphosphate pyrophosphatase OS=Mus musculus GN=Itpa PE=1 SV=2	257.0	[0..1]	[183..6]
gi\|91082307 - gi\|91082307\|ref\|XP_974197.1\| PREDICTED: similar to inosine triphosphate pyrophosphatase [Tribolium c...	256.0	[0..1]	[188..1]
ITPA_AEDAE - Inosine triphosphate pyrophosphatase OS=Aedes aegypti GN=AAEL008605 PE=3 SV=1	256.0	[0..1]	[187..1]

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Predicted Domain #1

Region A:
Residues: [1-191]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKPITFVTG NAKKLEELVA ILGPSFPRTI VSKKIDLPEL QGDIDEIAIK KCKEAARQVN  60
   61 GPVLVEDTSL CFNALEGLPG PYIKWFLEKL QPEGLHRLLH GWENKSAQAI CTFGYCDGVD 120
  121 AEPLIFKGIT EGVIVEPRGP RDFGWDPVFQ PSGYDKTYAE LPKSEKNTIS HRYRALALLR 180
  181 QHFEKQDKLI N

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	67.69897
Match:	2i5dA
Description:	No description for 2i5dA was found.

Predicted functions:

Term	Confidence	Notes
nucleoside-triphosphate diphosphatase activity	2.4486133651528	bayes_pls_golite062009
binding	1.2828743465361	bayes_pls_golite062009
protein binding	0.121994365068808	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: