| Protein: | gi|220947170, gi... |
| Organism: | synthetic construct |
| Length: | 1089 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220947170, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
659.0 | [0..1] | [1023..1] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MNSLARVFSN FRDFYNDINA ATLTGAIDVI VVEQRDGEFQ CSPFHVRFGK LGVLRSREKV 60
61 VDIEINGVPV DIQMKLGDSG EAFFVEECLE DEDEELPANL ATSPIPNSFL A
|
| Detection Method: |  |
| Confidence: | 74.275724 |
| Match: | PF04571.5 |
| Description: | No description for PF04571.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [112-294] |
1 11 21 31 41 51
| | | | | |
1 SRDKANDTME DISGVVTDKN ASEELLLPLP LPRRNSIDFS KEEPKEAVVE GSKFENQVSD 60
61 YTQRRHTDNT LERRNLSEKL KEFTTQKIRQ EWAEHEELFQ GEKKPADSDS LDNQSKASNE 120
121 AETEKAIPAV IEDTEKEKDQ IKPDVNLTTV TTSEATKEVS KSKTKKRRKK SQMKKNAQRK 180
181 NSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [295-457] |
1 11 21 31 41 51
| | | | | |
1 SSSLGSAGGG DLPSAETPSL GVSNIDEGDA PISSATNNNN TSSSNDEQLS APLVTARTGD 60
61 DSPLSEIPHT PTSNPRLDLD IHFFSDTEIT TPVGGGGAGS GRAAGGRPST PIQSDSELET 120
121 TMRDNRHVVT EESTASWKWG ELPTPEQAKN EAMSAAQVQQ SEH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [458-764] |
1 11 21 31 41 51
| | | | | |
1 QSMLSNMFSF MKRANRLRKE KGVGEVGDIY LSDLDAGSMD PEMAALYFPS PLSKAASPPE 60
61 EDGESGNGTS LPHSPSSLEE GQKSIDSDFD ETKQQRDNNR YLDFVAMSMC GMSEQGAPPS 120
121 DEEFDRHLVN YPDVCKSPSI FSSPNLVVRL NGKYYTWMAA CPIVMTMITF QKPLTHDAIE 180
181 QLMSQTVDGK CLPGDEKQEA VAQADNGGQT KRYWWSWRRS QDAAPNHLNN THGMPLGKDE 240
241 KDGDQAAVAT QTSRPTSPDI TDPTLSKSDS LVNAENTSAL VDNLEELTMA SNKSDEPKER 300
301 YKKSLRL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [765-834] |
1 11 21 31 41 51
| | | | | |
1 SSAAIKKLNL KEGMNEIEFS VTTAYQGTTR CKCYLFRWKH NDKVVISDID GTITKSDVLG 60
61 HILPMVGKDW
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 2etxA |
| Description: | Crystal Structure of MDC1 Tandem BRCT Domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [835-1089] |
1 11 21 31 41 51
| | | | | |
1 AQLGVAQLFS KIEQNGYKLL YLSARAIGQS RVTREYLRSI RQGNVMLPDG PLLLNPTSLI 60
61 SAFHREVIEK KPEQFKIACL SDIRDLFPDK EPFYAGYGNR INDVWAYRAV GIPIMRIFTI 120
121 NTKGELKHEL TQTFQSSGYI NQSLEVDEYF PLLTNQDEFD YRTDIFDDEE SEEELQFSDD 180
181 YDVDVEHGSS EESSGDEDDD EALYNDDFAN DDNGIQAVVA SGDERTADVG LIMRVRRVST 240
241 KNEVIMASPP KWINS
|
| Detection Method: | |
| Confidence: | 1.16 |
| Match: | 2i33A |
| Description: | No description for 2i33A was found. |
