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View Structure Prediction Details

Protein: gi|170687931, gi...
Organism: Bacillus anthracis str. A0465
Length: 100 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|170687931, gi....

Description E-value Query
Range
Subject
Range
PTJB_BACSU, PTCB... - Lichenan-specific phosphotransferase enzyme IIB component OS=Bacillus subtilis GN=licB PE=1 SV=1, (P...
PTJB_BACSU - Lichenan-specific phosphotransferase enzyme IIB component OS=Bacillus subtilis (strain 168) GN=licB ...
gi|221321063 - gi|221321063|ref|ZP_03602357.1| phosphotransferase system (PTS) lichenan-specific enzyme IIB compone...
gi|221325348 - gi|221325348|ref|ZP_03606642.1| phosphotransferase system (PTS) lichenan-specific enzyme IIB compone...
gi|221316152 - gi|221316152|ref|ZP_03597957.1| phosphotransferase system (PTS) lichenan-specific enzyme IIB compone...
9.0E-34 [1..98] [1..98]
gi|47553317, gi|... - gi|47570018|ref|ZP_00240680.1| PTS system, IIB component [Bacillus cereus G9241], gi|47569712|ref|ZP...
2.0E-33 [1..100] [1..100]
gi|228652801, gi... - gi|229130462|ref|ZP_04259418.1| PTS system, IIB component [Bacillus cereus BDRD-Cer4], gi|228652801|...
gi|229050877, gi... - gi|229050877|ref|ZP_04194429.1| PTS system, IIB component [Bacillus cereus AH676], gi|228722533|gb|E...
gi|228798224, gi... - gi|228961454|ref|ZP_04123066.1| PTS system, IIB component [Bacillus thuringiensis serovar pakistani ...
gi|29898809, gi|... - gi|30023249|ref|NP_834880.1| PTS system, lichenan oligosaccharide-specific IIB component [Bacillus c...
3.0E-33 [1..100] [1..100]
gi|222098672, gi... - gi|222098672|ref|YP_002532730.1| PTS system, cellobiose-specific IIB component [Bacillus cereus Q1],...
gi|75759428, gi|... - gi|75759428|ref|ZP_00739522.1| PTS system, lichenan oligosaccharide-specific IIB component [Bacillus...
gi|217962699, gi... - gi|217962699|ref|YP_002341273.1| PTS system, cellobiose-specific IIB component [Bacillus cereus AH18...
gi|218544811, gi... - gi|218900334|ref|YP_002448745.1| PTS system, cellobiose-specific IIB component [Bacillus cereus G984...
gi|225867181, gi... - gi|225867181|ref|YP_002752559.1| PTS system, cellobiose-specific IIB component [Bacillus cereus 03BB...
gi|196045715, gi... - gi|196045715|ref|ZP_03112945.1| PTS system, cellobiose-specific IIB component [Bacillus cereus 03BB1...
gi|206744924, gi... - gi|206976789|ref|ZP_03237692.1| PTS system, cellobiose-specific IIB component [Bacillus cereus H3081...
4.0E-33 [1..100] [1..100]
gi|52140350, gi|... - gi|52140350|ref|YP_086479.1| PTS system, cellobiose-specific IIB subunit [Bacillus cereus E33L], gi|...
5.0E-33 [1..100] [1..100]
PTEB_GEOSE - Cellobiose-specific phosphotransferase enzyme IIB component OS=Geobacillus stearothermophilus GN=cel...
8.0E-33 [1..99] [1..99]
gi|42740303, gi|... - gi|42784371|ref|NP_981618.1| PTS system, cellobiose-specific IIB component [Bacillus cereus ATCC 109...
1.0E-32 [1..100] [1..100]
gi|52787766, gi|... - gi|52787766|ref|YP_093595.1| LicB [Bacillus licheniformis ATCC 14580], gi|52350268|gb|AAU42902.1| Li...
2.0E-32 [1..98] [1..98]
gi|89086742, gi|... - gi|89098497|ref|ZP_01171380.1| PTS system, cellobiose-specific IIB component [Bacillus sp. NRRL B-14...
2.0E-32 [1..98] [20..117]
gi|89150746, gi|... - gi|89201159|ref|ZP_01179905.1| Phosphotransferase system, lactose/cellobiose-specific IIB subunit [B...
3.0E-32 [1..99] [1..99]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNILLCCAAG MSSSLIVTKM EKAAEARGIE VKIWAVSGSE VNSHIDEADV LLLGPQVRYL  60
   61 LPKMKELCKG KGVPVDVIQS VHYGLCNGEA ILQAALSMKP 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.30103
Match: 1h9cA
Description: Enzyme IIB-cellobiose
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein-N(PI)-phosphohistidine-sugar phosphotransferase activity 5.08041453921791 bayes_pls_golite062009
carbohydrate transmembrane transporter activity 4.49138214292642 bayes_pls_golite062009
glucoside transmembrane transporter activity 1.83892097143526 bayes_pls_golite062009
sugar transmembrane transporter activity 1.77053981674308 bayes_pls_golite062009
transporter activity 1.6837050020547 bayes_pls_golite062009
transmembrane transporter activity 1.5685227361887 bayes_pls_golite062009
substrate-specific transporter activity 1.32293422112884 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 1.217268678967 bayes_pls_golite062009
active transmembrane transporter activity 1.12964417923438 bayes_pls_golite062009
monosaccharide transmembrane transporter activity 0.71593290802554 bayes_pls_golite062009
catalytic activity 0.676259875978821 bayes_pls_golite062009
beta-glucoside transmembrane transporter activity 0.50967675887857 bayes_pls_golite062009
binding 0.472595683811139 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.37663629577414 bayes_pls_golite062009
fructose transmembrane transporter activity 0.225562559709031 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.0296784994545702 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle