YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|190564379, gi...
Organism:	Bacillus anthracis Tsiankovskii-I
Length:	113 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190564379, gi....

Description	E-value	Query Range	Subject Range
gi\|20093930, gi\|... - gi\|20093930\|ref\|NP_613777.1\| fused ProFAR isomerase-like protein/uncharacterized protein [Methanopyr...	153.0	[0..3]	[112..237]
gi\|51975460, gi\|... - gi\|52141991\|ref\|YP_084839.1\| hypothetical protein BCZK3253 [Bacillus cereus E33L], gi\|51975460\|gb\|AA...	151.0	[0..1]	[113..1]
gi\|42782608, gi\|... - gi\|42782608\|ref\|NP_979855.1\| hypothetical protein BCE_3558 [Bacillus cereus ATCC 10987], gi\|42738534...	151.0	[0..1]	[113..1]
gi\|74490225, gi\|... - gi\|75762286\|ref\|ZP_00742170.1\| Hypothetical cytosolic protein [Bacillus thuringiensis serovar israel...	150.0	[0..1]	[113..4]
gi\|47568902, gi\|... - gi\|47568902\|ref\|ZP_00239594.1\| hypothetical protein cytosolic protein [Bacillus cereus G9241], gi\|47...	146.0	[0..1]	[113..1]
gi\|28272284, gi\|... - gi\|28379445\|ref\|NP_786337.1\| hypothetical protein lp_3017 [Lactobacillus plantarum WCFS1], gi\|282722... gi\|227855531, gi... - gi\|227896188\|ref\|ZP_04013993.1\| conserved hypothetical protein [Lactobacillus plantarum subsp. plant... gi\|254046512, gi... - gi\|254557584\|ref\|YP_003064001.1\| hypothetical protein JDM1_2418 [Lactobacillus plantarum JDM1], gi\|2...	145.0	[0..5]	[112..4]
gi\|30021646, gi\|... - gi\|30021646\|ref\|NP_833277.1\| putative cytoplasmic protein [Bacillus cereus ATCC 14579], gi\|29897201\|...	144.0	[0..1]	[113..1]
gi\|228660354, gi... - gi\|229123060\|ref\|ZP_04252267.1\| Hypothetical cytosolic protein [Bacillus cereus 95/8201], gi\|2286603... gi\|228812406, gi... - gi\|228947159\|ref\|ZP_04109453.1\| Hypothetical cytosolic protein [Bacillus thuringiensis serovar monte... gi\|65320820 - gi\|65320820\|ref\|ZP_00393779.1\| COG4043: Uncharacterized conserved protein [Bacillus anthracis str. A... gi\|228843355, gi... - gi\|228916157\|ref\|ZP_04079727.1\| Hypothetical cytosolic protein [Bacillus thuringiensis serovar pulsi... gi\|228824718, gi... - gi\|228934818\|ref\|ZP_04097649.1\| Hypothetical cytosolic protein [Bacillus thuringiensis serovar andal... gi\|228928581, gi... - gi\|228928581\|ref\|ZP_04091618.1\| Hypothetical cytosolic protein [Bacillus thuringiensis serovar pondi...	142.0	[0..5]	[113..1]
gi\|116618236, gi... - gi\|116618236\|ref\|YP_818607.1\| hypothetical protein LEUM_1135 [Leuconostoc mesenteroides subsp. mesen...	138.0	[0..5]	[108..3]
gi\|25489507 - pir\|\|H83751 hypothetical protein BH0816 [imported] - Bacillus halodurans (strain C-125) gi\|15613379, gi\|... - gi\|15613379\|ref\|NP_241682.1\| hypothetical protein BH0816 [Bacillus halodurans C-125], gi\|10173430\|db...	137.0	[0..1]	[110..1]

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Predicted Domain #1

Region A:
Residues: [1-113]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYEMGLYNK PFQSIQSGKK VYEVRLYDKK RQLINKGDEI VFTNLTTKEM MAVKVTEIKR  60
   61 YESFKVMYEQ IDKKLMDCEN DSLEEMLEST YKIYTKEQEK EWGTVAIGIE VIK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.154902
Match:	1s04A
Description:	Solution Structure Of The Hypothetical Protein PF0455 From Pyrococcus furiosus: Northeast Structural Genomics Consortium Target PfR13
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits