YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|194197424, gi...
Organism:	Drosophila simulans
Length:	114 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|194197424, gi....

Description	E-value	Query Range	Subject Range
gi\|116310771, gi... - gi\|125548975\|gb\|EAY94797.1\| hypothetical protein OsI_16580 [Oryza sativa Indica Group], gi\|116310771... GRXC6_ORYSA, GLR... - Glutaredoxin-C6 (Glutaredoxin-C2 homolog 1) - Oryza sativa (Rice), (P55142) Glutaredoxin GRXC6_ORYSJ - Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2	130.0	[0..18]	[113..1]
gi\|15637350 - gi\|15637350\|gb\|AAL04507.1\|AF406809_1 glutaredoxin [Tilia platyphyllos]	130.0	[0..18]	[113..1]
GLRX_ORYSA - (P55142) Glutaredoxin	129.0	[0..18]	[113..1]
gi\|46443262, gi\|... - gi\|77022768\|ref\|XP_888828.1\| hypothetical protein CaO19_6509 [Candida albicans SC5314], gi\|68470145\|... gi\|238883366 - gi\|238883366\|gb\|EEQ47004.1\| glutaredoxin [Candida albicans WO-1] gi\|76573641 - gi\|76573641\|dbj\|BAE44725.1\| hypothetical protein [Candida albicans]	129.0	[0..1]	[113..41]
gi\|2724050, gi\|2... - gi\|2724056\|gb\|AAB92658.1\| glutaredoxin type I [Fritillaria agrestis], gi\|2724054\|gb\|AAB92657.1\| glut...	129.0	[0..18]	[113..1]
gi\|125978901, gi... - gi\|54642245\|gb\|EAL30994.1\| GA19906-PA [Drosophila pseudoobscura], gi\|125978901\|ref\|XP_001353483.1\| G...	128.0	[0..1]	[111..1]
gi\|21618084 - gi\|21618084\|gb\|AAM67134.1\| glutaredoxin-like protein [Arabidopsis thaliana]	127.0	[0..1]	[113..1]
gi\|22294596, gi\|... - gi\|22298417\|ref\|NP_681664.1\| hypothetical protein tll0874 [Thermosynechococcus elongatus BP-1], gi\|2...	126.0	[0..6]	[114..6]
gi\|92897215 - gi\|92897215\|gb\|ABE93576.1\| Glutaredoxin [Medicago truncatula]	126.0	[0..1]	[113..1]

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Predicted Domain #1

Region A:
Residues: [1-114]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAVGSALRS PIVDMSTKQA KFVENTIASN KVVIFSKTYC PYCTMAKEPF KKLNVDATII  60
   61 ELDGNPDGNE IQAVLGEITG ARTVPRVFID GKFIGGGTDI KRMFETGALQ KYFQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.30103
Match:	2ht9A
Description:	No description for 2ht9A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits