YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|170708508, gi...
Organism:	Bacillus anthracis str. A0389
Length:	321 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|170708508, gi....

Description	E-value	Query Range	Subject Range
gi\|29894344, gi\|... - gi\|30018802\|ref\|NP_830433.1\| Iron(III) dicitrate-binding protein [Bacillus cereus ATCC 14579], gi\|29...	2.0E-78	[1..321]	[1..322]
gi\|47568059, gi\|... - gi\|47568059\|ref\|ZP_00238764.1\| iron(III) dicitrate-binding protein [Bacillus cereus G9241], gi\|47555...	1.0E-74	[1..321]	[1..321]
gi\|218537656, gi... - gi\|218901809\|ref\|YP_002449643.1\| iron compound ABC transporter, iron compound-binding protein [Bacil... gi\|196035642, gi... - gi\|196035642\|ref\|ZP_03103045.1\| iron compound ABC transporter, iron compound-binding protein [Bacill... gi\|49331763, gi\|... - gi\|49480207\|ref\|YP_034872.1\| iron(III) dicitrate ABC transporter, periplasmic protein [Bacillus thur... gi\|118476298, gi... - gi\|118476298\|ref\|YP_893449.1\| iron(III) dicitrate ABC transporter, periplasmic protein [Bacillus thu...	2.0E-74	[1..321]	[1..321]
gi\|42735678, gi\|... - gi\|42779761\|ref\|NP_977008.1\| iron compound ABC transporter, iron compound-binding protein [Bacillus ...	2.0E-74	[1..321]	[1..321]
gi\|51978166, gi\|... - gi\|52144697\|ref\|YP_082131.1\| iron(III) dicitrate ABC transporter, periplasmic protein [Bacillus cere...	4.0E-74	[1..321]	[1..321]
gi\|56419992, gi\|... - gi\|56419992\|ref\|YP_147310.1\| iron(III) dicitrate ABC transporter (lipoprotein) [Geobacillus kaustoph...	4.0E-67	[4..321]	[1..320]
gi\|89208509, gi\|... - gi\|89208509\|ref\|ZP_01187012.1\| Periplasmic binding protein [Bacillus weihenstephanensis KBAB4], gi\|8...	1.0E-66	[4..321]	[1..320]
gi\|195993369, gi... - gi\|196033689\|ref\|ZP_03101100.1\| putative iron compound-binding protein [Bacillus cereus W], gi\|19599... gi\|218903396, gi... - gi\|218903396\|ref\|YP_002451230.1\| putative iron compound-binding protein [Bacillus cereus AH820], gi\|... gi\|177649236, gi... - gi\|177649236\|ref\|ZP_02932238.1\| putative iron compound-binding protein [Bacillus anthracis str. A017... gi\|190565195, gi... - gi\|190565195\|ref\|ZP_03018115.1\| putative iron compound-binding protein [Bacillus anthracis Tsiankovs... gi\|170687082, gi... - gi\|170687082\|ref\|ZP_02878301.1\| putative iron compound-binding protein [Bacillus anthracis str. A046... gi\|170706658, gi... - gi\|170706658\|ref\|ZP_02897117.1\| putative iron compound-binding protein [Bacillus anthracis str. A038... gi\|167632809, gi... - gi\|167632809\|ref\|ZP_02391135.1\| putative iron compound-binding protein [Bacillus anthracis str. A044... gi\|49185110, gi\|... - gi\|49185110\|ref\|YP_028362.1\| substrate-binding family protein, putative [Bacillus anthracis str. Ste... gi\|167639729, gi... - gi\|167639729\|ref\|ZP_02397999.1\| putative iron compound-binding protein [Bacillus anthracis str. A019... gi\|165870502, gi... - gi\|165870502\|ref\|ZP_02215156.1\| putative iron compound-binding protein [Bacillus anthracis str. A048... gi\|47502699, gi\|... - gi\|47527551\|ref\|YP_018900.1\| substrate-binding family protein, putative [Bacillus anthracis str. 'Am... gi\|227005241, gi... - gi\|227814930\|ref\|YP_002814939.1\| putative iron compound-binding protein [Bacillus anthracis str. CDC... gi\|30256899, gi\|... - gi\|30262268\|ref\|NP_844645.1\| substrate-binding family protein, putative [Bacillus anthracis str. Ame... gi\|229599981, gi... - gi\|229599981\|ref\|YP_002866608.1\| putative iron compound-binding protein [Bacillus anthracis str. A02... gi\|21400132 - ref\|NP_656117.1\| Peripla_BP_2, Periplasmic binding protein [Bacillus anthracis str. A2012] gi\|254737282 - gi\|254737282\|ref\|ZP_05194986.1\| putative iron compound-binding protein [Bacillus anthracis str. West... gi\|254743532 - gi\|254743532\|ref\|ZP_05201217.1\| putative iron compound-binding protein [Bacillus anthracis str. Krug... gi\|254684836 - gi\|254684836\|ref\|ZP_05148696.1\| putative iron compound-binding protein [Bacillus anthracis str. CNEV... gi\|254722244 - gi\|254722244\|ref\|ZP_05184032.1\| putative iron compound-binding protein [Bacillus anthracis str. A105... gi\|254751598 - gi\|254751598\|ref\|ZP_05203635.1\| putative iron compound-binding protein [Bacillus anthracis str. Voll... gi\|254760118 - gi\|254760118\|ref\|ZP_05212142.1\| putative iron compound-binding protein [Bacillus anthracis str. Aust...	1.0E-66	[4..321]	[1..320]

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Predicted Domain #1

Region A:
Residues: [1-321]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFMRKKSFT VFVFSLAFSL LLSACGKSNT KEESKEDTKK EMIPVEHAMG KTEVPANPKR  60
   61 VVILTNEGTE ALLELGVKPV GAVKSWTGDP WYPHIKDKMK DVKVVGDEGQ VNVETIASLK 120
  121 PDLIIGNKMR HEKVYEQLKA IAPTVFSETL RGEWKDNFKF YAKALNKEKD GQKVLAAYDK 180
  181 RMKDLKAKLG DKVNQEISMV RFMPGDVRIY HGDTFSGVIL KELGFKRPGD QNKNDFAERN 240
  241 VSKERISAMD GDVLFYFTFD KGNEKKGSEL EKEYINDPLF KNLNAVKNGK AYKVDDVIWN 300
  301 TAGGVMAANL LLDDIEKRFV K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	42.0
Match:	2chuA
Description:	No description for 2chuA was found.

Predicted functions:

Term	Confidence	Notes
transition metal ion transmembrane transporter activity	3.87852363960987	bayes_pls_golite062009
iron ion transmembrane transporter activity	3.83829731613698	bayes_pls_golite062009
cation transmembrane transporter activity	2.89017679202044	bayes_pls_golite062009
ion transmembrane transporter activity	2.82855968199764	bayes_pls_golite062009
metal ion transmembrane transporter activity	2.70354394999067	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	2.56825162601064	bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity	2.43729264143875	bayes_pls_golite062009
transporter activity	2.12407655395775	bayes_pls_golite062009
siderophore transporter activity	2.06074201308788	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	2.00990008986751	bayes_pls_golite062009
siderophore-iron transmembrane transporter activity	1.8612171704528	bayes_pls_golite062009
transmembrane transporter activity	1.71565596749022	bayes_pls_golite062009
active transmembrane transporter activity	1.18061423605374	bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity	1.13141267190653	bayes_pls_golite062009
primary active transmembrane transporter activity	1.12707873013446	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.12215201014266	bayes_pls_golite062009
ATPase activity, coupled to movement of substances	1.12215201014266	bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances	1.12176509475129	bayes_pls_golite062009
ATPase activity, coupled	0.82644963270613	bayes_pls_golite062009
substrate-specific transporter activity	0.75988725183257	bayes_pls_golite062009
ATPase activity	0.69786001264916	bayes_pls_golite062009
nucleoside-triphosphatase activity	0.6571215031711	bayes_pls_golite062009
pyrophosphatase activity	0.62286698166539	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.61399064290254	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.61327477119588	bayes_pls_golite062009
binding	0.491558239542048	bayes_pls_golite062009
iron ion binding	0.25054928928725	bayes_pls_golite062009
transition metal ion binding	0.1643386915523	bayes_pls_golite062009
catalytic activity	0.130495772245536	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: