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View Structure Prediction Details

Protein: gi|31873838
Organism: Homo sapiens
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|31873838.

Description E-value Query
Range
Subject
Range
gi|12839220 - gi|12839220|dbj|BAB24472.1| unnamed protein product [Mus musculus]
0.0 [54..246] [120..312]
CENPP - centromere protein P
0.0 [54..247] [95..288]
CENPP_CHICK - Centromere protein P OS=Gallus gallus GN=CENPP PE=1 SV=1
4.0E-54 [39..245] [85..287]
gi|57525887, gi|... - gi|57525887|ref|NP_001003555.1| centromere protein P [Danio rerio], gi|50418539|gb|AAH78335.1| Centr...
6.0E-46 [51..243] [90..282]

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Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRAGRSDSCA AGPAAVSNAP WTQSWQRCAP CKLRSRPCGE RVRTHRRPGK RSPESSIRKV  60
   61 LQRHRLSGNC HMVTFQLEFQ ILEIQNKERL SSAVTDLNII MEPTECSELS EFVSRAEERK 120
  121 DLFMFFRSLH FFVEWFEYRK RTFKHLKEKY PDAVYLSEGP SSCSMGIRSA SRPGFELVIV 180
  181 WRIQIDEDGK VFPKLDLLTK VPQRALELDK NRAIETAPLS FRTLVGLLGI EAALESLIKS 240
  241 LCAEENN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle