YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|218193653
Organism: Oryza sativa Indica Group
Length: 594 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218193653.

Description E-value Query
Range
Subject
Range
gi|108710782 - gi|108710782|gb|ABF98577.1| 3,4-dihydroxy-2-butanone kinase, putative, expressed [Oryza sativa (japo...
666.0 [0..1] [594..1]

Back

Predicted Domain #1
Region A:
Residues: [1-594]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQGKKLIN DPNDVVTEFI EGLVETYPGL QYLDGFPQIK VVLRADVVQG AYDKVAVISG  60
   61 GGSGHEPTHA GFVGPGMLTA AVSGDVFTSP PVDSILAAIR AVTGPMGCLL IVKNYTGDRL 120
  121 NFGLAAEQAK SEGYKMEMVI VGDDCALPPP RGIAGRRGLA GTILVHKVAG AAADAGLSLA 180
  181 EVAAEAKHAS EVVGTMGVAL SVCTLPGQVT SDRLGPKQME LGLGIHGEPG VAVVELQPID 240
  241 VVVEHVLKQI LSQETQYLPI TRGSNVVLLI NGLGATPIME LMIAARKAVP ELQLEYGIAV 300
  301 DRVYTGTLMT SLDMAGFSIT IMRSDENILQ RLDAPTKAPA WPVGSEGNRP PAKIPVPVPP 360
  361 SPSGKDDEIL TEPQELSKQG CILEAAIEAG AKEIINIKDN LNEWDSKVGD GDCGTTMYRG 420
  421 ATTILEDLKK RYPMNDAAGT INEIGSTVRR VMGGTSGILY DILCKAAYAS LKQNTSIGAN 480
  481 EWADALEASV AAVSKYGGAS AGYRTMLDAL IPACTVLKQS LKAGDDPVTA FIASSEAASA 540
  541 GAESTKQMQA KAGRSSYIAP DLVASVPDPG AVAAAAWYRA AAHAVKSKLH ASDS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 143.0
Match: 1un9A
Description: Crystal structure of the dihydroxyacetone kinase from C. freundii in complex with AMP-PNP and Mg2+
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glycerone kinase activity 3.66907507772019 bayes_pls_golite062009
binding 0.69038000262198 bayes_pls_golite062009
catalytic activity 0.142389024724964 bayes_pls_golite062009
protein binding 0.133716715271428 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle