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View Structure Prediction Details

Protein: gi|50726629, gi|...
Organism: Oryza sativa Japonica Group
Length: 660 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50726629, gi|....

Description E-value Query
Range
Subject
Range
P4KG7_ARATH - Phosphatidylinositol 4-kinase gamma 7 OS=Arabidopsis thaliana GN=PI4KG7 PE=1 SV=2
754.0 [0..1] [660..1]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRDLDCPVQ TQMAVAVLDR SFSSEYPASS RTEGRSCSWK RVFVQTENGY VLGIELERGE  60
   61 NAHTVKKKLQ VALKVPTEES SLTFGDLVLN NDLSSIRNDS PLLLRKNQMH RSSSTPCLSP 120
  121 T

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.09691
Match: 2ojrA
Description: No description for 2ojrA was found.

Predicted Domain #2
Region A:
Residues: [122-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AHDVQEQDHS EPIEILGCLS PSSRMKQLAK DVVEAIRNGV DPVPVNSGMG GAYYFKNIYG  60
   61 ERVAIVKPTD EEPFAPNNPK GFVGKTLGLP GLKRSVPVGE TGLREVAAYL LDHDNFANVP 120
  121 PTMLVKITHS VFNV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [256-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDTVSCKSKV FHNKLQAVSK LASLQQFIAH DYDASDHGTS SFPVSAVHRI GILDIRIFNT  60
   61 DRHAGNLLVR KLGPGPDNFG VQTELIPIDH GLCLPESLED PYFEWIHWPQ ASIPFTEEEL 120
  121 EYIANLDPVK DAEMLRLELP FIRGACLRVL VLSTIFLKEA AAFGLCLSEI GEMMSRQFTG 180
  181 KEEEPSELEL LCMEARKWVK KREL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [460-660]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FLPEAGVEDD NDGITQFSID SEDGSDASEL PSFSKFGLMN ASHRNPLSKL DECDEEDGEE  60
   61 EEDDDGDEED DDEDMFKDDA GNLKNPFSKH IPSVSKLSAS FKGLGFIGKA RAYHKGVPKN 120
  121 KVTAKTNYSG KGSEHQSGSR SANELLPPSA SFVKLSDMGS DEWSAFLDKF QELLPSAFRA 180
  181 RKHAAADGPR PLQRLGTSCQ F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle