| Protein: | gi|51090583, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 447 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51090583, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..3] | [379..57] |
|
Region A: Residues: [1-228] |
1 11 21 31 41 51
| | | | | |
1 MALRRINLRK KPLLLFPRPF SSSSSPNPPF PPPPPPPNDR DDASPKPSEG EGRNPAASLF 60
61 QDLRDRLMST PSHLPSRRIP TAPPPRPSGN AEPVASIDDI RRQLESYRGS LAARGAPPGS 120
121 SPDGAAPSLL DLVRSTSSPT SPQGPNSGHF SSLAESLRNL PSGRQPQQRR QPRSTTPFLS 180
181 PTAHPIFGRE LGENARKAEG KEENSAIELK KEYSYAELGK KLGQLRPS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [229-327] |
1 11 21 31 41 51
| | | | | |
1 GAGNDGKEWF SLEELQGRIA KLANLDIADD MRLGGQYVAL RKSLLGIQAD QKTKDDIKKT 60
61 RSMQGLSFLA NIGGPATPQY LQHPPQEELL ERYFHPDHM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.767 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.762 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.702 | a.39.1 | EF-hand |
| View | Download | 0.702 | a.39.1 | EF-hand |
| View | Download | 0.618 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.618 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.600 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.600 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.482 | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.475 | a.60.9 | lambda integrase-like, N-terminal domain |
|
Region A: Residues: [328-447] |
1 11 21 31 41 51
| | | | | |
1 SSEEKMKLEL QRVRDEFKMS ENDCGSARVQ IAQLTVKIKH LSTVLHKKDK HSRKGLQDMV 60
61 QRRKKYLKYL RRTDWDSYCL VLSKLGLRDV PEYKAPDYKN KSTSKAKSKK SKSKKRKMKA 120
121
|
| Detection Method: | |
| Confidence: | 39.69897 |
| Match: | 1a32A |
| Description: | RIBOSOMAL PROTEIN S15 FROM BACILLUS STEAROTHERMOPHILUS |
Matching Structure (courtesy of the PDB): |
|
