| Protein: | gi|255678941, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 679 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|255678941, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
784.0 | [0..1] | [666..1] |
|
|
671.0 | [0..13] | [673..15] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MAPKMVISLG SSRRRKRGEM LFRFEAFCQP GYPANFAGAG GFRDNVRTLL GFAHLEAGVH 60
61 GETKCWSFQL ELHRHPPTVV RLFVVEEEVA ASPHRQCHLC RHIGWGRHLI CSKRYHFLLP 120
121 RRESAAEADG LCFAINHGGG GGAEKASSKG TTTTASSRGH LLHGVVHLNG YGHLVALHGL 180
181 EGGSDFVSGH QIMDLWDRIC SAL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [204-315] |
1 11 21 31 41 51
| | | | | |
1 HVRTVSLVDT ARKGHMELRL LHGVAYGETW FGRWGYRYGR PSYGVALPSY RQSLHVLGSM 60
61 PLCVLVPHLS CFSQELPMVV TKYQAISGHK LLSLGDLLRF MLELRARLPA TS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.530 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.530 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.400 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.392 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.387 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.365 | N/A | N/A | c.55.3 | Ribonuclease H-like |
| View | Download | 0.346 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.346 | N/A | N/A | a.39.1 | EF-hand |
|
Region A: Residues: [316-399] |
1 11 21 31 41 51
| | | | | |
1 VTAMDYRGIM SEASCRWSAK RVDMAARAVV DALRRAEPAA RWVTRQEVRD AARAYIGDTG 60
61 LLDFVLKSLG NHIVGNYVVR RTMN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.734 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.728 | a.247.1 | Description not found. |
| View | Download | 0.722 | a.48.4 | Description not found. |
| View | Download | 0.718 | a.24.28 | Description not found. |
| View | Download | 0.699 | a.74.1 | Cyclin-like |
| View | Download | 0.699 | a.74.1 | Cyclin-like |
| View | Download | 0.695 | a.4.1 | Homeodomain-like |
| View | Download | 0.643 | a.57.1 | Protein HNS-dependent expression A; HdeA |
|
Region A: Residues: [400-491] |
1 11 21 31 41 51
| | | | | |
1 PVTKVLEYCL EDVSSVLPAV AAGGGVPAQG KMRVRFQLTR AQLMRDLVHL YRHVLKEPSQ 60
61 ALTGGAFGAI PVAVRMVLDI KHFVKDYHEG QA
|
| Detection Method: | |
| Confidence: | 15.09691 |
| Match: | 2eqyA |
| Description: | No description for 2eqyA was found. |
|
Region A: Residues: [492-564] |
1 11 21 31 41 51
| | | | | |
1 AASSNGGGGF GHPHINLCCT LLVSNGSPEL APPYETVTLP AHATVGELKW EAQRVFSEMY 60
61 LGLRSFAADS VVG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.838 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.838 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.710 | a.4.1 | Homeodomain-like |
| View | Download | 0.694 | a.8.9 | Description not found. |
| View | Download | 0.675 | a.251.1 | Description not found. |
| View | Download | 0.656 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.594 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
|
Region A: Residues: [565-679] |
1 11 21 31 41 51
| | | | | |
1 VGADQEGLPV LGLVDVGSAV VVQGSVGEQI NGEDHERKEE AAAAAVCEGS GGGERVVDCA 60
61 CGAVDDDGER MACCDICEAW QHTRCAGIAD TEDAPHVFLC SRCDNDVVSF PSFNC
|
| Detection Method: | |
| Confidence: | 10.522879 |
| Match: | 1weeA |
| Description: | Solution structure of PHD domain in PHD finger family protein |
Matching Structure (courtesy of the PDB): |
|
