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View Structure Prediction Details

Protein: gi|115480671, gi...
Organism: Oryza sativa Japonica Group
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115480671, gi....

Description E-value Query
Range
Subject
Range
gi|112031429 - gi|112031429|gb|ABH88162.1| molybdenum cofactor sulfurase-like protein 1 [Oryza sativa (japonica cul...
386.0 [0..1] [324..1]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKAAGFLSS LLGGGEEVPP EPAATVRSIL IYPIKSCRGI SVPQAPITST GFRWDRQWVV  60
   61 VNSKGRAYTQ RVEPKLALVE VEMPPEAFAE EWRPTADSYL VGRAPGMDPL KIPLSAEQAI 120
  121 INDVSVWEWS GSAYDEGAEA AEWFSSYFGN PSRLVRFKEG SEIRPTNP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.30103
Match: 2exnA
Description: Solution structure for the protein coded by gene locus BB0938 of Bordetella bronchiseptica. Northeast Structural Genomics target BoR11.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [169-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYAQGYKIMF TDCFPFLMAS QGSLDALNEV LKEPVPMNRF RPNILVDGCH PYSEDLWKTI  60
   61 KINKLTFQGV KLCNRCKVPT INQENGILGT EPTETLLTFR SDEVLRPSHK NKRQVYFGQN 120
  121 LVCKESLSAK GKGRIIKVSD PVYVLERFPS SDEAPA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.87
Match: 1oruA
Description: Crystal Structure of APC1665, YUAD protein from Bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.125452850367999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle