Protein: | gi|115466266, gi... |
Organism: | Oryza sativa Japonica Group |
Length: | 316 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115466266, gi....
Description | E-value | Query Range |
Subject Range |
|
261.0 | [0..40] | [309..3] |
|
253.0 | [0..38] | [308..3] |
|
247.0 | [0..48] | [306..24] |
|
237.0 | [0..71] | [306..2] |
|
236.0 | [0..71] | [306..2] |
|
235.0 | [0..65] | [314..1] |
|
230.0 | [0..40] | [316..46] |
|
230.0 | [0..65] | [313..1] |
|
229.0 | [0..5] | [276..134] |
|
229.0 | [0..71] | [305..2] |
Region A: Residues: [1-66] |
1 11 21 31 41 51 | | | | | | 1 MPQASSSSSP ATAAAPPPPQ PAADPSPSAV PASEEALDPQ TPAPPPQAQP EAVLTAAQKA 60 61 LRSKPT |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [67-183] |
1 11 21 31 41 51 | | | | | | 1 RPPEDSDKKN KKLKDVEISF PIVYGTISFW LGKKASEYNS HKWTVYVRSA TNEDLSVIVK 60 61 RVVFQLHPSF TNPTRVVEQP PFELSESGWG EFEIAITLYF HSDVCEKRLD LFHQLKL |
Detection Method: | ![]() |
Confidence: | 41.677781 |
Match: | PF03366.7 |
Description: | No description for PF03366.7 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.564 | N/A | N/A | d.17.4 | NTF2-like |
View | Download | 0.485 | N/A | N/A | d.17.4 | NTF2-like |
View | Download | 0.468 | N/A | N/A | b.61.1 | Avidin/streptavidin |
View | Download | 0.468 | N/A | N/A | b.61.1 | Avidin/streptavidin |
View | Download | 0.427 | N/A | N/A | d.17.4 | NTF2-like |
View | Download | 0.415 | N/A | N/A | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
View | Download | 0.344 | N/A | N/A | b.3.4 | Transthyretin (prealbumin) |
View | Download | 0.309 | N/A | N/A | d.93.1 | SH2 domain |
View | Download | 0.304 | N/A | N/A | b.115.1 | Fucose-binding lectin II (PA-IIL) |
View | Download | 0.295 | N/A | N/A | d.110.3 | PYP-like sensor domain (PAS domain) |
Region A: Residues: [184-316] |
1 11 21 31 41 51 | | | | | | 1 YPEEDTGPQS TKKPVVVETY DEIVFPEPTE AFFQRVQNHP AATVPRLPPG ITLPPPGPME 60 61 LVPHEKKRGD TKDHPLSQWF SNFSEADELL KLAAARQQVQ AHIAKLRRQL SMIDGMPQQS 120 121 KAVSVQGQQF GHG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.482 | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.341 | a.216.1 | Description not found. |
View | Download | 0.270 | a.22.1 | Histone-fold |
View | Download | 0.270 | a.22.1 | Histone-fold |
View | Download | 0.268 | c.20.1 | Initiation factor IF2/eIF5b, domain 3 |
View | Download | 0.264 | a.63.1 | Apolipophorin-III |
View | Download | 0.260 | c.55.3 | Ribonuclease H-like |
View | Download | 0.242 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
View | Download | 0.232 | a.24.9 | alpha-catenin/vinculin |