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View Structure Prediction Details

Protein: ODP24_ARATH
Organism: Arabidopsis thaliana
Length: 480 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ODP24_ARATH.

Description E-value Query
Range
Subject
Range
gi|126096730, gi... - gi|126207938|ref|YP_001053163.1| dihydrolipoyllysine-residue succinyltransferase component of 2-oxog...
gi|32034768 - gi|32034768|ref|ZP_00134893.1| COG0508: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoam...
gi|189914931, gi... - gi|190149800|ref|YP_001968325.1| dihydrolipoyllysine-residue succinyltransferase component of 2-oxog...
425.0 [0..54] [480..1]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSSSSFLS TASLTNSKSN ISFASSVSPS LRSVVFRSTT PATSHRRSMT VRSKIREIFM  60
   61 PALSSTMTEG KIVSWIKTEG EKLAKGESVV VVESDKADMD VETFYDGYLA AIVVGEGETA 120
  121 PVGAAIGLLA ETEAEIEEAK SKAASKSSSS VAEAVVPSPP PVTSSPAPAI AQPAPVTAVS 180
  181 DGPRKTVATP YAKKLAKQHK VDIESVAGTG PFGRITASDV ETAAGIAPSK SSIAP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 1zy8K
Description: The crystal structure of dihydrolipoamide dehydrogenase and dihydrolipoamide dehydrogenase-binding protein (didomain) subcomplex of human pyruvate dehydrogenase complex.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [236-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPPPPPVTA KATTTNLPPL LPDSSIVPFT AMQSAVSKNM IESLSVPTFR VGYPVNTDAL  60
   61 DALYEKVKPK GVTMTALLAK AAGMALAQHP VVNASCKDGK SFSYNSSINI AVAVAINGGL 120
  121 ITPVLQDADK LDLYLLSQKW KELVGKARSK QLQPHEYNSG TFTLSNLGMF GVDRFDAILP 180
  181 PGQGAIMAVG ASKPTVVADK DGFFSVKNTM LVNVTADHRI VYGADLAAFL QTFAKIIENP 240
  241 DSLTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.045757
Match: 2ihwA
Description: No description for 2ihwA was found.

YRC Informatics Platform - Version 3.0
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