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View Structure Prediction Details

Protein: CLE44_ARATH
Organism: Arabidopsis thaliana
Length: 112 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLE44_ARATH.

Description E-value Query
Range
Subject
Range
gi|21618193 - gi|21618193|gb|AAM67243.1| unknown [Arabidopsis thaliana]
159.0 [0..1] [112..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTIDQTSI KSLHFHQVIR LIITIIFLAF LFLIGPTSSM NHHLHESSSK NTMAPSKRFL  60
   61 LQPSTPSSST MKMRPTAHPR RSGTSSSSAR KRRREFRAEA HEVPSGPNPI SN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.232 a.40.1 Calponin-homology domain, CH-domain
View Download 0.215 d.226.1 GIY-YIG endonuclease


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle