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View Structure Prediction Details

Protein: DEGP7_ARATH
Organism: Arabidopsis thaliana
Length: 1097 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for DEGP7_ARATH.

Predicted Domain #1
Region A:
Residues: [1-473]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDPLERLGS QASMATESVM KEDLCLEIDP PLTESVATAE DWRRALGKVV PAVVVLRTTA  60
   61 CRAFDTESAG ASYATGFIVD KRRGIILTNR HVVKPGPVVA EAMFVNREEI PIYPVYRDPV 120
  121 HDFGFFCYDP SAVQFLTYQE IPLAPEAASV GLEIRVVGND SGEKVSILAG TLARLDRDAP 180
  181 HYKKDGYNDF NTFYMQAASG TKGGSSGSPV IDWQGRAVAL NAGSKSSSAS AFFLPLQRVV 240
  241 RALSFLQKSI DSRTDKPKAV HIPRGTLQMT FLHKGFDEIR RLGLRSETEQ VVRHASPTGE 300
  301 TGMLVVDSVV PSGPADKHLE PGDVLVRVNG TVLTQFLNLE NLLDDGVGQI LELEIERGGQ 360
  361 PLSVSVSVQD LHSITPDHFL EVSGAVIHPL SYQQARNFRF PCGLAYVADP GYMLFRAGVP 420
  421 RHAIIKKVAN EDISSLGDLV SVLSKLSRGA RVPLEYMSHT DRHRKKSVLV TID

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.69897
Match: 2zleA
Description: No description for 2zleA was found.

Predicted Domain #2
Region A:
Residues: [474-627]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HHEWYAPPQL YTRNDSSGLW DAKPAIEPAS VSPSIGNNGF PISQDISLCH HDTEPMHEVN  60
   61 VRGVTDIAAI METSSGDGSQ NDFGSEAKKQ RVDEDSSDGI AANGSLYGSE FKSDDAMETD 120
  121 TTVLRDFEGA TALSANASLA ERAIEPALVM FEVH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [628-865]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPPSCSLDGV HSQHFFGTGI IIYHSSNMGL AVVDKNTVAI SASDVMLSFA AFPVEIPGEV  60
   61 VFLHPVHNYA LIAYNPSAMD PASASVIRAA ELLPEPALQR GDSVYLVGLS RNLQATSRKS 120
  121 IVTNPCAALN IGSADSPRYR ATNMEVIELD TDFGSSFSGA LTDEQGRIRA IWGSFSTQVK 180
  181 YSSTSSEDHQ FVRGIPVYAI SQVLEKIITG GNGPALLING VKRPMPLVRI LEVELYPT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 1dt2A
Description: Exfoliative toxin B
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [866-1097]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLSKARSFGL SDEWIQVLVK KDPVRRQVLR VKGCLAGSKA ENLLEQGDMV LAVNKMPVTC  60
   61 FNDIEAACQT LDKGSYSDEN LNLTILRQGQ ELELVVGTDK RDGNGTTRVI NWCGCVVQDP 120
  121 HPAVRALGFL PEEGHGVYVT RWCHGSPAHR YGLYALQWIV EVNGKKTPDL NAFADATKEL 180
  181 EHGQFVRIRT VHLNGKPRVL TLKQDLHYWP TWELRFDPET ALWRRNILKA LQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.30103
Match: 1p1dA
Description: Structural Insights into the Inter-domain Chaperoning of Tandem PDZ Domains in Glutamate Receptor Interacting Proteins
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle