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View Structure Prediction Details

Protein: LAC11_ARATH
Organism: Arabidopsis thaliana
Length: 557 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAC11_ARATH.

Description E-value Query
Range
Subject
Range
gi|11255520, gi|... - gi|9757777|dbj|BAB08386.1| laccase (diphenol oxidase)-like protein [Arabidopsis thaliana], gi|741360...
525.0 [0..3] [557..1]

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Predicted Domain #1
Region A:
Residues: [1-557]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMGFLFLFC YLLAFLGYSP VDAAVKKYQF DVQVKNISRI CNAKPIVTVN GMFPGPTVYA  60
   61 REGDRVIINV TNHVQYNMSI HWHGLKQYRN GWADGPAYIT QCPIQTGQSY LYDFNVTGQR 120
  121 GTLWWHAHIL WLRATVYGAI VILPAPGKPY PFPQPYQESN IILGEWWNKD VETAVNQANQ 180
  181 LGAPPPMSDA HTINGKPGPL FPCSEKHTFV IEAEAGKTYL LRIINAALND ELFFGIAGHN 240
  241 MTVVEIDAVY TKPFTTKAIL LGPGQTTNVL VKTDRSPNRY FMAASPFMDA PVSVDNKTVT 300
  301 AILQYKGVPN TVLPILPKLP LPNDTSFALD YNGKLKSLNT PNFPALVPLK VDRRLFYTIG 360
  361 LGINACPTCV NGTNLAASIN NITFIMPKTA LLKAHYSNIS GVFRTDFPDR PPKAFNYTGV 420
  421 PLTANLGTST GTRLSRVKFN TTIELVLQDT NLLTVESHPF HLHGYNFFVV GTGVGNFDPK 480
  481 KDPAKFNLVD PPERNTVGVP TGGWAAIRFR ADNPGVWFMH CHLEVHTMWG LKMAFVVENG 540
  541 ETPELSVLPP PKDYPSC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 112.0
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
inorganic cation transmembrane transporter activity 4.86417846685632 bayes_pls_golite062009
cation transmembrane transporter activity 4.85872378524044 bayes_pls_golite062009
ion transmembrane transporter activity 4.83377537341486 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 4.66193431249175 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 4.18036443727889 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 4.11692911500018 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 4.03662762689573 bayes_pls_golite062009
transporter activity 3.19308963442841 bayes_pls_golite062009
transmembrane transporter activity 3.00719579355004 bayes_pls_golite062009
copper ion binding 2.87295204378656 bayes_pls_golite062009
substrate-specific transporter activity 2.81821270952204 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 2.49123749292703 bayes_pls_golite062009
active transmembrane transporter activity 2.10862095701488 bayes_pls_golite062009
primary active transmembrane transporter activity 1.9851494986709 bayes_pls_golite062009
copper ion transmembrane transporter activity 1.86902581831295 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.65566057418201 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions 1.55524630095061 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions, oxygen as acceptor 0.76206075753137 bayes_pls_golite062009
ferroxidase activity 0.76206075753137 bayes_pls_golite062009
binding 0.686229070803119 bayes_pls_golite062009
heme-copper terminal oxidase activity 0.379596275876029 bayes_pls_golite062009
transition metal ion binding 0.342547544679237 bayes_pls_golite062009
iron ion transmembrane transporter activity 0.267475794325159 bayes_pls_golite062009
cytochrome-c oxidase activity 0.222255654263847 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors 0.222255654263847 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor 0.222255654263847 bayes_pls_golite062009
protein binding 0.0393017564630179 bayes_pls_golite062009

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