| Protein: | gi|18424704, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 680 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18424704, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
360.0 | [0..1] | [678..294] |
|
Region A: Residues: [1-273] |
1 11 21 31 41 51
| | | | | |
1 MGLFKFIFLL SLLWSFYSLG SSQLQASQAQ VLLQLKKHLE YPQQLESWYD HRTNFCYLQA 60
61 TPSMNITCFS NSVSELNIFG DKSSEKAKSF DGFAISNVTL SDGFSIESFV TTLSRLKSLR 120
121 VLTLASLGIW GRLPEKLHRL SSLEYLDLSN NFLFGSVPPK LSTMVKLETF RFDHNFFNGT 180
181 LPSWFDSYWY LKVLSFKSNK LSGELHSSLL SLSTIEYIDL RANSLSGSLP DDLKCGSKLW 240
241 FIDISDNKLT GKLPRCLSSK QDIALRFNGN CLS
|
| Detection Method: |  |
| Confidence: | 15.09691 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [274-357] |
1 11 21 31 41 51
| | | | | |
1 LEKQQHPESF CVKEVRAAAK AEAKAEAEAA NESGKRKWKK GALIGLIVGI SMSVLVLVCC 60
61 VFILLRRKGV TKKHVHHNTV QDNH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [358-576] |
1 11 21 31 41 51
| | | | | |
1 PTTGFSSEIL SNARYISETS KFGSEDLPVC RQFSLEEIVK ATKNFDKTMI LGESSLYGTL 60
61 YKGNLENGTK VAIRCLPSSK KYSIRNLKLR LDLLAKLRHP NLVCLLGHCI DCGGKDDYSV 120
121 EKVFLIYEYI PNGNFQSCLS DNSSGKGMNW SERLNVLTGV AKAVHFLHTG VIPGFFSNRL 180
181 KTNNVLLNQH RFAKLSDYGL SIVSEATRHN TEIAKSWQM
|
| Detection Method: | |
| Confidence: | 7.19 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
|
Region A: Residues: [577-680] |
1 11 21 31 41 51
| | | | | |
1 SRLEDDVYSF GLILLQSIVG PSVSAREEAF LRDELASLES EEGRRRMVNP TVQATCRNGS 60
61 LIRVITLMNK CVSPESLSRP SFEDILWNLQ YASQLQAASD GDQC
|
| Detection Method: | |
| Confidence: | 60.39794 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
