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View Structure Prediction Details

Protein: PIP_ARATH
Organism: Arabidopsis thaliana
Length: 380 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIP_ARATH.

Description E-value Query
Range
Subject
Range
gi|1710151 - gi|1710151|gb|AAC49560.1| proline iminopeptidase [Arabidopsis thaliana]
210.0 [0..52] [369..1]

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Predicted Domain #1
Region A:
Residues: [1-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLILASFSL APCFCVRFFP SNHNNLNLLF PGQRKIQVSC GGKSEVLKSD TMEPHEAETF  60
   61 VNKRTLYAPI EPYSSGNLKV SDVHTLYWEQ SGKPDGHPVV FLHGGPGGGT APSNRRFFDP 120
  121 EFYRIVLFDQ RGAGKSTPHA CLEENTTWDL VNDIEKLREH LKIPEWLVFG GSWGSTLALA 180
  181 YSQSHPDKVT GLVLRGIFLL RKKEIDWFYE GGAAAIYPDA WEEFRDLIPE NERGSSLVDA 240
  241 YHKRLNSDDL EIQYAAARAW TKWEMMTAYL RPNLENVQKA EDDKFSLAFA RIENHYFVNK 300
  301 GFFPSDSHLL DNVDKIRHIK TTIVQGRYDV CCPMMSAWDL HKAWPEAELK IVYDAGHSAN 360
  361 EPGISAELVV ANEKMKALMG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.221849
Match: 1azwA
Description: Proline iminopeptidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.54323107406855 bayes_pls_golite062009
catalytic activity 1.76673721118052 bayes_pls_golite062009
peptidase activity 1.12259137179218 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.808794364499195 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.112278861211575 bayes_pls_golite062009
serine hydrolase activity 0.08085624250764 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle