Protein: | JMJ30_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 429 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JMJ30_ARATH.
Description | E-value | Query Range |
Subject Range |
|
416.0 | [0..1] | [429..1] |
|
371.0 | [0..15] | [420..22] |
|
370.0 | [0..15] | [420..22] |
|
369.0 | [0..9] | [420..2] |
|
368.0 | [0..9] | [420..2] |
|
366.0 | [0..15] | [420..22] |
|
353.0 | [0..9] | [420..2] |
|
339.0 | [0..15] | [420..11] |
Region A: Residues: [1-144] |
1 11 21 31 41 51 | | | | | | 1 MSGATTASSG DHNNLRLPTP TLDAESQTLL QSISAEGGYA YARMAVLAVA GDQSAAEAAR 60 61 DMAWEQLHSG PWHSVLPVWR DAYSMACLHV AKIHFAAGEF GEALGALDMG LIMGGMLLRK 120 121 DLHDSVLLVS SEARKMTKSL EEAS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.954 | a.118.8 | TPR-like |
View | Download | 0.954 | a.118.8 | TPR-like |
View | Download | 0.943 | a.118.8 | TPR-like |
View | Download | 0.943 | a.118.8 | TPR-like |
View | Download | 0.943 | a.118.8 | TPR-like |
View | Download | 0.943 | a.118.8 | TPR-like |
View | Download | 0.938 | a.118.9 | ENTH/VHS domain |
View | Download | 0.920 | a.118.8 | TPR-like |
View | Download | 0.920 | a.118.8 | TPR-like |
View | Download | 0.920 | a.118.8 | TPR-like |
Region A: Residues: [145-429] |
1 11 21 31 41 51 | | | | | | 1 GDFKGERLVP EVPVDVNEVR HVLANLQLLV LKILPCRSLT CKRVEKRSGL SLEGFLRDYY 60 61 LPGTPVVITN SMAHWPARTK WNHLDYLNAV AGNRTVPVEV GKNYLCSDWK QELVTFSKFL 120 121 ERMRTNKSSP MEPTYLAQHP LFDQINELRD DICIPDYCFV GGGELQSLNA WFGPAGTVTP 180 181 LHHDPHHNIL AQVVGKKYIR LYPSFLQDEL YPYSETMLCN SSQVDLDNID ETEFPKAMEL 240 241 EFMDCILEEG EMLYIPPKWW HYVRSLTMSL SVSFWWSNEA ESSSS |
Detection Method: | ![]() |
Confidence: | 41.522879 |
Match: | 1mzeA |
Description: | Hypoxia-inducible factor HIF ihhibitor (FIH1) |
Matching Structure (courtesy of the PDB):![]() |