| Protein: | gi|18416788, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 443 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18416788, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
528.0 | [0..1] | [443..1] |
|
|
317.0 | [0..62] | [421..43] |
|
|
251.0 | [0..70] | [442..1] |
|
|
222.0 | [0..34] | [292..8] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MGSGRDRDDP LSFTSNPSTA SSPVTVSDYL DNFLGEPTSR SGSFQSESLL GGGGGESIND 60
61 ADFGFARPDF RSEQLAGTVQ FYERHVFLCY KKPSVWPARI EAAEFDRLPR LLSAAVSARK 120
121 GSMKKETRLT ICEGHDGTET SNGDVLIFPD MIRYRRLTHF DVETFVEEVL VK
|
| Detection Method: |  |
| Confidence: | 1.02 |
| Match: | 1m2dA |
| Description: | Thioredoxin-like 2Fe-2S ferredoxin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [173-337] |
1 11 21 31 41 51
| | | | | |
1 DGEWLPGNPE LLKGSYVFVC SHGSRDRRCG VCGPSLVSRF REELEFHGLQ GKVSISPCSH 60
61 IGGHKYAGNV IIYRSNINRE VTGHWYGYVT PEDVPILLEQ HINKGEIVDR LWRGEMGLSE 120
121 EDQKKTQEGR FQLNGTVHSV KINGKVSQES SVHNADVSCC QSRAA
|
| Detection Method: | |
| Confidence: | 23.154902 |
| Match: | 1f37A |
| Description: | Thioredoxin-like 2Fe-2S ferredoxin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [338-443] |
1 11 21 31 41 51
| | | | | |
1 EPNGCCQQNG NSSSCCQDDT TLMLSLGTSE DNQLESENNT EKLTPGRKIA EKTFFRINSD 60
61 KGSSTRKVCG IPTWLESWER EDTYAALAVV CAAASVAVAY TCYKQL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.518 | a.24.22 | Description not found. |
| View | Download | 0.517 | a.24.19 | Description not found. |
| View | Download | 0.417 | a.60.8 | HRDC-like |
| View | Download | 0.388 | a.7.8 | GAT domain |
| View | Download | 0.388 | a.7.8 | GAT domain |
| View | Download | 0.378 | a.24.26 | Description not found. |
| View | Download | 0.359 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.286 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.276 | a.130.1 | Chorismate mutase II |
| View | Download | 0.263 | d.232.1 | Mago nashi protein |
| View | Download | 0.249 | a.7.8 | GAT domain |
| View | Download | 0.224 | a.7.8 | GAT domain |
