YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TUSD_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 131 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TUSD_PHOLL.

Description E-value Query
Range
Subject
Range
TUSD_VIBVU - Sulfurtransferase TusD homolog OS=Vibrio vulnificus (strain CMCP6) GN=tusD PE=3 SV=1
YD33_VIBVU, TUSD... - (Q8DCR3) Hypothetical UPF0163 protein VV11333, (Q8DCR3) UPF0163 protein VV11333, Sulfurtransferase T...
189.0 [0..1] [131..1]

Back

Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLSYCLLV TGPAYGTQQA SSAYQFAQAL ITMGHKLNTV FFYREGVYNG NQLTSPASDE  60
   61 FDLVSAWQMM ATEHRFSMHI CIAAALRRGV IDAQQASELN LPVANLAEGF ELSGLGTLAE 120
  121 AMLICDRVVQ F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 2d1pA
Description: crystal structure of heterohexameric TusBCD proteins, which are crucial for the tRNA modification
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle