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View Structure Prediction Details

Protein: DEOD_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 238 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DEOD_PHOLL.

Description E-value Query
Range
Subject
Range
gi|77973607 - gi|77973607|ref|ZP_00829153.1| COG0813: Purine-nucleoside phosphorylase [Yersinia frederiksenii ATCC...
240.0 [0..1] [238..1]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPHINAEM GDFADVVLMP GDPLRAKYIA ETFLENVRQV NDVRGMLGFT GTYKGRPISV  60
   61 MGHGMGIPSC SIYAKELITD FGAKVLIRVG SCGSVRHDVK LRDVVIGMGA CTDSKVNRIR 120
  121 FKDHDFAAIA DFDLVRNAVD AAKAKNINVR VGNIFSVELF YTPDPQLFDI MEKYGILGVE 180
  181 MEAAGFYGVA AEYGAKALTI CTVSDHIRTH EKLTAEERQT TFNEMIEIAL ESVLLGDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.045757
Match: 1pr0A
Description: Escherichia coli Purine Nucleoside Phosphorylase Complexed with Inosine and Phosphate/Sulfate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
purine-nucleoside phosphorylase activity 3.68206997938506 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 3.66765825367784 bayes_pls_golite062009
catalytic activity 2.18268586151113 bayes_pls_golite062009
transferase activity, transferring pentosyl groups 2.01261001022129 bayes_pls_golite062009
S-methyl-5-thioadenosine phosphorylase activity 1.6959166270803 bayes_pls_golite062009
transferase activity 1.42022417161912 bayes_pls_golite062009
nucleobase binding 1.33291775180025 bayes_pls_golite062009
nucleoside binding 1.11256863177576 bayes_pls_golite062009
purine binding 1.00226077276304 bayes_pls_golite062009
binding 0.192121943858605 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle