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View Structure Prediction Details

Protein: gi|36784398, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 268 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|36784398, gi|....

Description E-value Query
Range
Subject
Range
gi|27479658 - gi|27479658|gb|AAO17185.1| HpaI [Photorhabdus luminescens]
241.0 [0..1] [268..1]

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Predicted Domain #1
Region A:
Residues: [1-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRLTNKFKQ ALKAGQPQIG LWLGLCNPYS AELVAGAGFD WLLIDGEHAP NDIQTILSQL  60
   61 QAIAPYPSHP IVRPPWNDLV IIKQLLDIGA QTLLIPMIQN AEQAYEAVRA TRYPPAGIRG 120
  121 VGSALARASH WNRIPDYLHR ANDEICVLVQ VETREALRNL PEILKVDGVD GAFIGPADLS 180
  181 SDMGFTNNPQ HPEVKDAIEQ AIAQIKAAGK APGILMSAPN VAEHYLKLGA LFVAVGIDTT 240
  241 LLARTAEALA ARFIADKEPP VAPLSGVY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.69897
Match: 2v5jA
Description: No description for 2v5jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle