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View Structure Prediction Details

Protein: Y1293_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 87 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1293_PHOLL.

Description E-value Query
Range
Subject
Range
Y794_SODGM - UPF0250 protein SG0794 OS=Sodalis glossinidius (strain morsitans) GN=SG0794 PE=3 SV=1
145.0 [0..1] [87..1]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKLNELLE FPCSFTYKVM GLAEPELVNQ VVEVVQRHAP GDYSPQVKPS SKGNYHSVSI  60
   61 TINATHIEQV ETLYEELGNL ELVRVVL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.0
Match: 1rwuA
Description: Solution structure of conserved protein YbeD from E. coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle