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View Structure Prediction Details

Protein: Y2109_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y2109_PHOLL.

Description E-value Query
Range
Subject
Range
Y4410_PSEPF - Probable transcriptional regulatory protein Pfl01_4410 OS=Pseudomonas fluorescens (strain Pf0-1) GN=...
380.0 [0..1] [247..1]

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Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGHSKWANT KHRKAAQDAK RGKIFTKIIR ELVTAARLGG GDPASNPRLR AAIDKALSNN  60
   61 MTRDTLNRAI ARGVGSDEAD NMETIIYEGY GPGGTAVMVE CLSDNRNRTV SDVRHAFTKT 120
  121 GGNLGTDGSV AYLFAKKGVI SYAPGLDEDA VMEAALEAGA DDVETYDDGA IDVYTTPETF 180
  181 GDVKDALDAA GFVAESAEVS MIPSTKAELD AETAPKLLRL IDMLEDSDDV QEVYHNGEIS 240
  241 DEIAALL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 102.0
Match: 1konA
Description: Hypothetical protein YebC
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle