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View Structure Prediction Details

Protein: gi|37526074, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 224 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37526074, gi|....

Description E-value Query
Range
Subject
Range
gi|238799305, gi... - gi|77960106|ref|ZP_00823998.1| COG3121: P pilus assembly protein, chaperone PapD [Yersinia mollareti...
262.0 [0..1] [224..3]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYQRLFTVI FLYIISINFA IAGVVIGGTR VIYMSDKKEA SISISNPEKD APYLIQSWIQ  60
   61 DENDNMKTPF IVTPPIFKLA ADHENILRIV KTESNLPQDR ESLFWLNVKS IPTSVKSNQN 120
  121 QLQITVKSKF KLFYRPANLA EKSSTAYKEL KFRTENNSLI AENPTPYFIS FSYLKVDQHE 180
  181 IKPAGMIKPF SQLSWPLPAK NIKQVNWKAI NDFGGATAEE KTTI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.69897
Match: 1l4iA
Description: Periplasmic chaperone SfaE; SfaE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.703836445240299 bayes_pls_golite062009
protein binding 0.478023759565866 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle