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View Structure Prediction Details

Protein: gi|37527715, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37527715, gi|....

Description E-value Query
Range
Subject
Range
gi|66047520, gi|... - gi|66047520|ref|YP_237361.1| Acyl-CoA thioesterase [Pseudomonas syringae pv. syringae B728a], gi|632...
391.0 [0..1] [286..1]

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Predicted Domain #1
Region A:
Residues: [1-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSLQNLIN LMKLEKIEEG IYRGQSEDLG FPQVFGGQVI GQALYAAKQT VVDDRMGNSF  60
   61 HSYFLRPGDS HKPIVYDVEI LRDGGSFSAR RVSAIQNGKP IFYMTASFQS HEESFEHQNI 120
  121 MPDVPYPEEL IPQDEIVKKM SHLLPQKMQN TLLFPCPLEM RPVKYHSPFN CPPEEPIRYV 180
  181 WFRSNGNMPD NPFIHQYLLG YASDFNFLPT ALQPHGVGFL EKNIQIATID HSMWFHRPFR 240
  241 LDDWLLYAVD SPSASGARGF VRGQIYNREG ILVASTVQEG LIRKRNR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 1c8uA
Description: Thioesterase II (TesB)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-CoA thioesterase activity 2.60197973503923 bayes_pls_golite062009
CoA hydrolase activity 2.3187640589669 bayes_pls_golite062009
thiolester hydrolase activity 1.14125301545576 bayes_pls_golite062009
catalytic activity 0.74605540351792 bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity 0.119939116817186 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle