YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|36787334, gi\|...
Organism:	Photorhabdus luminescens subsp. laumondii TTO1
Length:	136 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|36787334, gi|....

Description	E-value	Query Range	Subject Range
gi\|224582450, gi... - gi\|224582450\|ref\|YP_002636248.1\| nucleoside diphosphate kinase regulator [Salmonella enterica subsp.... gi\|62179216, gi\|... - gi\|62179216\|ref\|YP_215633.1\| nucleoside diphosphate kinase regulator [Salmonella enterica subsp. ent...	160.0	[0..1]	[136..1]

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Predicted Domain #1

Region A:
Residues: [1-136]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKPAIIINE LDAERLDSLL EQPAFADTSI ADALNEELDR AEIVPPAEIP SDVVTMNSRV  60
   61 RFIDLTSNEE RVRTLVYPAS LQDSSDQLSV MAPLGAALLG LRIGDEISWE LPNGEETRVK 120
  121 VLELLYQPEA AGEYHR

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Detection Method:	PSI-BLAST
Confidence:	36.09691
Match:	2pn0A
Description:	No description for 2pn0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

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Top Sequence Alignment Hits