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View Structure Prediction Details

Protein: gi|30679573, gi|...
Organism: Arabidopsis thaliana
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30679573, gi|....

Description E-value Query
Range
Subject
Range
GLO2D_ARATH - Probable hydroxyacylglutathione hydrolase 2, chloroplastic OS=Arabidopsis thaliana GN=GLX2-4 PE=2 SV...
309.0 [0..1] [330..1]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAISKVSSA ASFFRCSRLV SQPCVRPCVR QLHVRKGLVS GVMKLFSSPL RTLRDAGKSV  60
   61 RISRFCSVSN VSSSLQIELV PCLTDNYAYI LHDEDTGTVG VVDPSEAVPV MDALQKNSRN 120
  121 LTYILNTHHH YDHTGGNLEL KDRYGAKVIG SAADRDRIPG IDVALKDADK WMFAGHEVHI 180
  181 METPGHTRGH ISFYFPGARA IFTGDTLFSL SCGKLFEGTP EQMLASLQRI IALPDDTSVY 240
  241 CGHEYTLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 1p9eA
Description: Crystal Structure Analysis of Methyl Parathion Hydrolase from Pseudomonas sp WBC-3
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydroxyacylglutathione hydrolase activity 3.53012507604564 bayes_pls_golite062009
catalytic activity 0.941400907161877 bayes_pls_golite062009
binding 0.900972948435178 bayes_pls_golite062009
thiolester hydrolase activity 0.802604883362264 bayes_pls_golite062009
hydrolase activity 0.021392930321391 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [249-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSKFALSIEP TNEVLQSYAA YVAELRDKKL PTIPTTMKME KACNPFLRTE NTDIRRALGI  60
   61 PETADEAEAL GIIRRAKDNF KA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.522879
Match: 1xm8A
Description: X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle