YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|228981993, gi...
Organism:	Bacillus thuringiensis Bt407
Length:	144 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|228981993, gi....

Description	E-value	Query Range	Subject Range
gi\|89095668, gi\|... - gi\|89095668\|ref\|ZP_01168562.1\| (3R)-hydroxymyristoyl ACP dehydratase [Bacillus sp. NRRL B-14911], gi...	187.0	[0..1]	[144..1]
gi\|114770497 - gi\|114770497\|ref\|ZP_01447987.1\| (3R)-hydroxymyristol acyl carrier protein dehydratase [alpha proteob... gi\|221133304 - gi\|221133304\|ref\|ZP_03559609.1\| 3-hydroxymyristol acyl carrier protein dehydratase [Glaciecola sp. H... gi\|114548678, gi... - gi\|114770497\|ref\|ZP_01447987.1\| (3R)-hydroxymyristol acyl carrier protein dehydratase [alpha proteob...	184.0	[0..2]	[142..8]
gi\|90413540, gi\|... - gi\|90413540\|ref\|ZP_01221531.1\| (3R)-hydroxymyristoyl ACP dehydratase [Photobacterium profundum 3TCK]...	184.0	[0..2]	[141..8]
gi\|91795797, gi\|... - gi\|92112707\|ref\|YP_572635.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Chromohalobacter salexigens DSM ...	184.0	[0..1]	[141..2]
gi\|213969129, gi... - gi\|213969129\|ref\|ZP_03397268.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Pseudomona... FABZ_PSESM - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. tomato (strain DC3... FABZ_PSESM - (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas syringae pv. tomato GN=fabZ ...	183.0	[0..1]	[141..1]
FABZ_PHOPR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Photobacterium profundum GN=fabZ PE=3 SV=1 FABZ_PHOPR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Photobacterium profundum (strain SS9) GN=fa...	183.0	[0..2]	[141..8]
FABZ_PSEHT - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudoalteromonas haloplanktis (strain TAC ...	183.0	[0..2]	[141..8]
FABZ_PSEU2 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. syringae (strain B... FABZ_PSE14 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas savastanoi pv. phaseolicola (st... tr\|F3G1L3\|F3G1L3... - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. pisi str. 1704B GN... gi\|237800154 - gi\|237800154\|ref\|ZP_04588615.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Pseudomonas syringae pv. oryz...	182.0	[0..1]	[141..1]
gi\|47505973, gi\|... - gi\|47530825\|ref\|YP_022174.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Bacillus anthracis str. 'Ames An... FABZ_BACAN - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus anthracis GN=fabZ PE=3 SV=1 gi\|49188102, gi\|... - gi\|49188102\|ref\|YP_031355.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Bacillus anthracis str. Sterne],... gi\|65317235, gi\|... - gi\|65317235\|ref\|ZP_00390194.1\| COG0764: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) ... gi\|30259968, gi\|... - gi\|30265290\|ref\|NP_847667.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Bacillus anthracis str. Ames], g... gi\|47569371, gi\|... - gi\|47569371\|ref\|ZP_00240054.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Bacillus ce... FABZ_BACC0 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus cereus (strain AH820) GN=fabZ PE=3... FABZ_BACAC - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus anthracis (strain CDC 684 / NRRL 3... gi\|229124772, gi... - gi\|229124772\|ref\|ZP_04253952.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|228624812, gi... - gi\|229158828\|ref\|ZP_04286886.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... FABZ_BACCZ - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus cereus (strain ZK / E33L) GN=fabZ ... gi\|229169973, gi... - gi\|229169973\|ref\|ZP_04297666.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... FABZ_BACAA - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus anthracis (strain A0248) GN=fabZ P... gi\|254686311 - gi\|254686311\|ref\|ZP_05150170.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Bacillus anthracis str. CNEVA... gi\|254724307 - gi\|254724307\|ref\|ZP_05186091.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Bacillus anthracis str. A1055... gi\|254735193 - gi\|254735193\|ref\|ZP_05192902.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Bacillus anthracis str. Weste... gi\|254744399 - gi\|254744399\|ref\|ZP_05202079.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Bacillus anthracis str. Kruge... gi\|254755701 - gi\|254755701\|ref\|ZP_05207734.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Bacillus anthracis str. Vollu... gi\|177654100, gi... - gi\|177654100\|ref\|ZP_02936110.1\| (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase [Bacillus a... gi\|254759567 - gi\|254759567\|ref\|ZP_05211592.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Bacillus anthracis str. Austr... gi\|164714388, gi... - gi\|165870065\|ref\|ZP_02214722.1\| (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase [Bacillus a... gi\|196036311, gi... - gi\|196036311\|ref\|ZP_03103709.1\| (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase [Bacillus c... gi\|190567771, gi... - gi\|190567771\|ref\|ZP_03020683.1\| (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase [Bacillus a...	182.0	[0..1]	[144..1]
FABZ_PSEE4 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas entomophila (strain L48) GN=fab... gi\|95112171 - gi\|95112171\|emb\|CAK16898.1\| (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase [Pseudomonas en...	182.0	[0..1]	[141..1]

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Predicted Domain #1

Region A:
Residues: [1-144]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNIEQIKEI IPHRYPFLLV DKILEVDEGK RAVGIKNVSA NEEFFNGHFP DYAVMPGVLI  60
   61 VEALAQVGAV AVLKKEENRG RLAFFAGIDN CRFKKQVRPG DQLRLEVEMT RVRGPIGKGK 120
  121 AIATVDGEVA CEAEITFAIG DKKE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	46.522879
Match:	1u1zA
Description:	The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits