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View Structure Prediction Details

Protein: gi|229545828, gi...
Organism: Enterococcus faecalis TX1322
Length: 259 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|229545828, gi....

Description E-value Query
Range
Subject
Range
gi|55153885 - gi|55153885|gb|AAH85315.1| Glyceraldehyde-3-phosphate dehydrogenase [Mus musculus]
234.0 [0..1] [223..1]
gi|27356782 - gi|27356782|gb|AAL49972.1| glyceraldehyde-3-phosphate dehydrogenase [Meriones unguiculatus]
233.0 [0..1] [223..1]
G3P_CRIGR - Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2
231.0 [0..1] [223..1]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKIIVAGFK GRMGSTATQM VLETADFELV GVYDPHEAQE TVSFNDETAI PVFQRLEEVL  60
   61 AVKPDVWIDF TVPEAAYPNT RFALEHGMAP VVGTTGFTEE QINELTNLSR EKAIGGLIAP 120
  121 NFAIGAVLMM QFAQKAAQYF PDVEIIELHH DNKLDAPSGT AIKTAEMIQE VRPAKKQGNP 180
  181 QEVESIPGAR GADFEGLRIH SVRLPGLVAH QQVQFGSVGE GLTIRHDSYD RRSFMTGVAL 240
  241 ACRQVVQRTE LLYGLEQML

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.09691
Match: 1yl5A
Description: Crystal structure of Mycobacterium tuberculosis dihydrodipicolinate reductase (RV2773C) (crystal form A)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity 2.60548927745815 bayes_pls_golite062009
catalytic activity 2.54843319568228 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors 1.54909195188343 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 0.841370849960815 bayes_pls_golite062009
saccharopine dehydrogenase activity 0.495113665163626 bayes_pls_golite062009
N-acetyl-gamma-glutamyl-phosphate reductase activity 0.0651785123513661 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle