YRC Public Data Repository - Protein Structure Prediction

Protein:	RS7_BACAA
Organism:	Bacillus anthracis str. A0248
Length:	156 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RS7_BACAA.

Description	E-value	Query Range	Subject Range
gi\|220706744, gi... - gi\|221089318\|ref\|ZP_03558838.1\| ribosomal protein S7 [Geobacillus sp. Y412MC61], gi\|220706744\|gb\|EED... gi\|229499926, gi... - gi\|229499926\|ref\|ZP_04393603.1\| ribosomal protein S7 [Geobacillus sp. Y412MC52], gi\|229329205\|gb\|EEN... RS7_GEOKA - 30S ribosomal protein S7 OS=Geobacillus kaustophilus GN=rpsG PE=3 SV=1 RS7_GEOKA - 30S ribosomal protein S7 OS=Geobacillus kaustophilus (strain HTA426) GN=rpsG PE=3 SV=1	1.0E-53	[1..156]	[1..156]
RS7_GEOSE - 30S ribosomal protein S7 OS=Geobacillus stearothermophilus GN=rpsG PE=1 SV=3	2.0E-53	[1..156]	[1..156]
RS7_RHILO - 30S ribosomal protein S7 OS=Rhizobium loti (strain MAFF303099) GN=rpsG PE=3 SV=1 RS7_RHILO - 30S ribosomal protein S7 OS=Rhizobium loti GN=rpsG PE=3 SV=1	5.0E-53	[1..156]	[1..156]
RS7_AGRFC - 30S ribosomal protein S7 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=rpsG PE=3 SV=1 gi\|25294576, gi\|... - gi\|25294576\|pir\|\|AD2816 30S ribosomal protein S7 [imported] - Agrobacterium tumefaciens (strain C58,...	7.0E-53	[1..156]	[1..156]
gi\|196253511, gi... - gi\|196253511\|ref\|ZP_03152135.1\| ribosomal protein S7 [Clostridium thermocellum DSM 4150], gi\|1961970... RS7_CLOTH - 30S ribosomal protein S7 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / N...	1.0E-52	[1..156]	[1..156]
RS7_CARHZ - 30S ribosomal protein S7 OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-29...	1.0E-52	[1..156]	[1..156]
RS7_BACLD - 30S ribosomal protein S7 OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 122...	3.0E-52	[1..156]	[1..156]
RS7_CHESB - 30S ribosomal protein S7 OS=Chelativorans sp. (strain BNC1) GN=rpsG PE=3 SV=1	3.0E-52	[1..156]	[1..156]
RS7_BRASB - 30S ribosomal protein S7 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rpsG PE=3 SV=1	4.0E-52	[1..156]	[1..156]
gi\|229041011, gi... - gi\|229041011\|ref\|ZP_04189774.1\| 30S ribosomal protein S7 [Bacillus cereus AH676], gi\|228727308\|gb\|EE... gi\|228956547, gi... - gi\|228956547\|ref\|ZP_04118343.1\| 30S ribosomal protein S7 [Bacillus thuringiensis serovar pakistani s... gi\|228950654, gi... - gi\|228950654\|ref\|ZP_04112788.1\| 30S ribosomal protein S7 [Bacillus thuringiensis serovar kurstaki st... gi\|228840581, gi... - gi\|228919056\|ref\|ZP_04082435.1\| 30S ribosomal protein S7 [Bacillus thuringiensis serovar huazhongens... gi\|206732874, gi... - gi\|206972300\|ref\|ZP_03233247.1\| 30S ribosomal protein S7 [Bacillus cereus AH1134], gi\|206732874\|gb\|E... gi\|228640533, gi... - gi\|229142912\|ref\|ZP_04271353.1\| 30S ribosomal protein S7 [Bacillus cereus BDRD-ST24], gi\|228640533\|g... RS7_BACC4 - 30S ribosomal protein S7 OS=Bacillus cereus (strain B4264) GN=rpsG PE=3 SV=1 gi\|228657815, gi... - gi\|229125623\|ref\|ZP_04254655.1\| 30S ribosomal protein S7 [Bacillus cereus BDRD-Cer4], gi\|228657815\|g... gi\|229107792, gi... - gi\|229107792\|ref\|ZP_04237428.1\| 30S ribosomal protein S7 [Bacillus cereus Rock1-15], gi\|228675641\|gb... gi\|229067871, gi... - gi\|229067871\|ref\|ZP_04201188.1\| 30S ribosomal protein S7 [Bacillus cereus F65185], gi\|228715230\|gb\|E... gi\|228595065, gi... - gi\|229188391\|ref\|ZP_04315439.1\| 30S ribosomal protein S7 [Bacillus cereus ATCC 10876], gi\|228595065\|... gi\|228606749, gi... - gi\|229176706\|ref\|ZP_04304110.1\| 30S ribosomal protein S7 [Bacillus cereus 172560W], gi\|228606749\|gb\|... gi\|228634931, gi... - gi\|229148515\|ref\|ZP_04276771.1\| 30S ribosomal protein S7 [Bacillus cereus m1550], gi\|228634931\|gb\|EE... RS7_BACCR - 30S ribosomal protein S7 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NC...	4.0E-52	[1..156]	[1..156]

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Predicted Domain #1

Region A:
Residues: [1-156]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRKGPVAKR DVLPDPMYNS KLVTRLINKM MVDGKKGKSQ TILYNAFDIV SERTGKEPME  60
   61 VFEQALKNIM PVLEVRARRV GGANYQVPVE VRPERRTTLG LRWLVNYARL RGEKTMEERL 120
  121 ANEILDAANN AGASVKKRED THKMAEANKA FAHYRW

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	53.69897
Match:	1husA
Description:	RIBOSOMAL PROTEIN S7
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
structural constituent of ribosome	10.1836043075256	bayes_pls_golite062009
structural molecule activity	9.60531852031349	bayes_pls_golite062009
RNA binding	2.69930050072854	bayes_pls_golite062009
nucleic acid binding	1.38138936047113	bayes_pls_golite062009
binding	0.87606732735391	bayes_pls_golite062009
protein binding	0.060050417638174	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: