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View Structure Prediction Details

Protein: gi|229331715, gi...
Organism: Geobacillus sp. Y412MC52
Length: 124 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|229331715, gi....

Description E-value Query
Range
Subject
Range
gi|52081404, gi|... - gi|52081404|ref|YP_080195.1| S-adenosylmethionine decarboxylase proenzyme [Bacillus licheniformis AT...
187.0 [0..1] [123..1]
gi|89084915, gi|... - gi|89100396|ref|ZP_01173260.1| S-adenosylmethionine decarboxylase proenzyme [Bacillus sp. NRRL B-149...
182.0 [0..1] [123..1]
SPEH_BACSU - S-adenosylmethionine decarboxylase proenzyme OS=Bacillus subtilis GN=speD PE=1 SV=1
gi|2635366, gi|1... - gi|2635366|emb|CAB14861.1| S-adenosylmethionine decarboxylase [Bacillus subtilis subsp. subtilis str...
182.0 [0..1] [123..3]
SPEH_CARHZ - S-adenosylmethionine decarboxylase proenzyme OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-1...
174.0 [0..1] [124..1]
SPH1_BACHD, SPEH... - (Q9K859) S-adenosylmethionine decarboxylase proenzyme 1 (EC 4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contai...
SPEH2_BACHD - S-adenosylmethionine decarboxylase proenzyme 2 OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 181...
173.0 [0..1] [122..1]
gi|88945067, gi|... - gi|88945067|ref|ZP_01148287.1| Adenosylmethionine decarboxylase [Desulfotomaculum reducens MI-1], gi...
171.0 [0..1] [115..1]
SPEH_CALS8 - S-adenosylmethionine decarboxylase proenzyme OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43...
SPEH_CALBD - S-adenosylmethionine decarboxylase proenzyme OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / ...
170.0 [0..1] [120..1]
SPEH_CLOTH - S-adenosylmethionine decarboxylase proenzyme OS=Clostridium thermocellum (strain ATCC 27405 / DSM 12...
170.0 [0..1] [120..1]
SPEH_BACCN - S-adenosylmethionine decarboxylase proenzyme OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 ...
169.0 [0..1] [122..4]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTMGRHVIS ELWGCDFDKL NDIDFIEKTF VDAALKSGAE IREVAFHKFA PQGVSGVVII  60
   61 SESHLTIHTF PEHGYASIDV YTCGHLDPTI AADYIAEMLG AQTRETIELP RGMRPIEVKK 120
  121 AQAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.522879
Match: 1vr7A
Description: Crystal structure of S-adenosylmethionine decarboxylase proenzyme (TM0655) from THERMOTOGA MARITIMA at 1.2 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle