YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|227176353, gi...
Organism: Enterococcus faecalis HH22
Length: 161 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|227176353, gi....

Description E-value Query
Range
Subject
Range
gi|39995284, gi|... - gi|39995284|ref|NP_951235.1| hypothetical protein GSU0173 [Geobacter sulfurreducens PCA], gi|3998204...
242.0 [0..3] [157..11]

Back

Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEQMWIEKL GLEAHPEGGY FKQTNKSEQL IPTKRGERAL HTAILFLLNT ESPSHFHRLK  60
   61 ADELWFFHDG QPLTVHCIFP DGTYQAVQLG KDLVQGQQLS FSVPAGTIFG STVATGFALV 120
  121 SCVVTPGFEF EDFELFTQAE LLNDYPQHSE IIQHLAYREL P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.39794
Match: 1yudA
Description: Crystal structure of hypothetical protein SO0799 from Shewanella oneidensis
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle