YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|225789020, gi...
Organism:	Bacillus cereus 03BB102
Length:	211 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|225789020, gi....

Description	E-value	Query Range	Subject Range
gi\|228652439, gi... - gi\|229131027\|ref\|ZP_04259943.1\| Deoxyguanosine kinase [Bacillus cereus BDRD-ST196], gi\|228652439\|gb\|... gi\|163938028, gi... - gi\|89208561\|ref\|ZP_01187061.1\| Deoxynucleoside kinase [Bacillus weihenstephanensis KBAB4], gi\|891535... gi\|229053866, gi... - gi\|229053866\|ref\|ZP_04195303.1\| Deoxyguanosine kinase [Bacillus cereus AH603], gi\|228721476\|gb\|EEL72... gi\|228618461, gi... - gi\|229165009\|ref\|ZP_04292807.1\| Deoxyguanosine kinase [Bacillus cereus AH621], gi\|228618461\|gb\|EEK75...	8.0E-36	[1..211]	[1..211]
gi\|51978663, gi\|... - gi\|52145194\|ref\|YP_081634.1\| deoxyguanosine kinase [Bacillus cereus E33L], gi\|51978663\|gb\|AAU20213.1... gi\|221237835, gi... - gi\|222093789\|ref\|YP_002527837.1\| deoxyguanosine kinase [Bacillus cereus Q1], gi\|221237835\|gb\|ACM1054... gi\|217957596, gi... - gi\|217957596\|ref\|YP_002336138.1\| deoxynucleoside kinase family protein [Bacillus cereus AH187], gi\|2... gi\|228776455, gi... - gi\|228983275\|ref\|ZP_04143490.1\| Deoxyguanosine kinase [Bacillus thuringiensis serovar tochigiensis B... gi\|42779097, gi\|... - gi\|42779097\|ref\|NP_976344.1\| deoxynucleoside kinase family protein [Bacillus cereus ATCC 10987], gi\|... gi\|206743436, gi... - gi\|206978344\|ref\|ZP_03239218.1\| deoxynucleoside kinase family protein [Bacillus cereus H3081.97], gi... gi\|228589066, gi... - gi\|229194410\|ref\|ZP_04321215.1\| Deoxyguanosine kinase [Bacillus cereus m1293], gi\|228589066\|gb\|EEK47... gi\|229153799, gi... - gi\|229153799\|ref\|ZP_04281931.1\| Deoxyguanosine kinase [Bacillus cereus ATCC 4342], gi\|228629668\|gb\|E... gi\|228646598, gi... - gi\|229136863\|ref\|ZP_04265492.1\| Deoxyguanosine kinase [Bacillus cereus BDRD-ST26], gi\|228646598\|gb\|E...	1.0E-35	[1..211]	[1..211]
gi\|206972677, gi... - gi\|206972677\|ref\|ZP_03233617.1\| deoxynucleoside kinase family protein [Bacillus cereus AH1134], gi\|2... gi\|228809110, gi... - gi\|228950567\|ref\|ZP_04112703.1\| Deoxyguanosine kinase [Bacillus thuringiensis serovar kurstaki str. ... gi\|228918970, gi... - gi\|228918970\|ref\|ZP_04082351.1\| Deoxyguanosine kinase [Bacillus thuringiensis serovar huazhongensis ... gi\|229107705, gi... - gi\|229107705\|ref\|ZP_04237343.1\| Deoxyguanosine kinase [Bacillus cereus Rock1-15], gi\|228675745\|gb\|EE... gi\|229067783, gi... - gi\|229067783\|ref\|ZP_04201102.1\| Deoxyguanosine kinase [Bacillus cereus F65185], gi\|228715336\|gb\|EEL6... gi\|229039924, gi... - gi\|229039924\|ref\|ZP_04189690.1\| Deoxyguanosine kinase [Bacillus cereus AH676], gi\|228727414\|gb\|EEL78... gi\|228803217, gi... - gi\|228956460\|ref\|ZP_04118258.1\| Deoxyguanosine kinase [Bacillus thuringiensis serovar pakistani str.... gi\|228606849, gi... - gi\|229176619\|ref\|ZP_04304025.1\| Deoxyguanosine kinase [Bacillus cereus 172560W], gi\|228606849\|gb\|EEK... gi\|228635037, gi... - gi\|229148428\|ref\|ZP_04276686.1\| Deoxyguanosine kinase [Bacillus cereus m1550], gi\|228635037\|gb\|EEK91... gi\|228640639, gi... - gi\|229142825\|ref\|ZP_04271269.1\| Deoxyguanosine kinase [Bacillus cereus BDRD-ST24], gi\|228640639\|gb\|E... gi\|228657920, gi... - gi\|229125536\|ref\|ZP_04254570.1\| Deoxyguanosine kinase [Bacillus cereus BDRD-Cer4], gi\|228657920\|gb\|E... gi\|228595172, gi... - gi\|229188304\|ref\|ZP_04315355.1\| Deoxyguanosine kinase [Bacillus cereus ATCC 10876], gi\|228595172\|gb\|... gi\|87312651 - gi\|87312651\|gb\|ABD37691.1\| deoxyguanosine kinase [synthetic construct] gi\|29893832, gi\|... - gi\|30018292\|ref\|NP_829923.1\| deoxyguanosine kinase [Bacillus cereus ATCC 14579], gi\|29893832\|gb\|AAP0...	1.0E-35	[1..211]	[1..211]
DGK_BACSU - Deoxyguanosine kinase OS=Bacillus subtilis (strain 168) GN=dgk PE=1 SV=1 YAAG_BACSU, DGK_... - Uncharacterized protein yaaG OS=Bacillus subtilis GN=yaaG PE=4 SV=1, Deoxyguanosine kinase OS=Bacill... gi\|221321342 - gi\|221321342\|ref\|ZP_03602636.1\| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. SMY] gi\|221317079 - gi\|221317079\|ref\|ZP_03598373.1\| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. JH642] gi\|221312146 - gi\|221312146\|ref\|ZP_03593951.1\| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. NCIB 3...	1.0E-35	[1..206]	[1..206]
gi\|65317482 - gi\|65317482\|ref\|ZP_00390441.1\| COG1428: Deoxynucleoside kinases [Bacillus anthracis str. A2012] gi\|118475793, gi... - gi\|118475793\|ref\|YP_892944.1\| deoxyguanosine kinase [Bacillus thuringiensis str. Al Hakam], gi\|11841...	3.0E-35	[6..211]	[12..217]
gi\|22775694, gi\|... - gi\|23097471\|ref\|NP_690937.1\| deoxypurine kinase subunit [Oceanobacillus iheyensis HTE831], gi\|227756...	5.0E-35	[1..211]	[1..211]
gi\|74488722, gi\|... - gi\|75763791\|ref\|ZP_00743452.1\| Deoxyguanosine kinase [Bacillus thuringiensis serovar israelensis ATC...	6.0E-35	[6..211]	[12..217]
gi\|152022620, gi... - gi\|89203308\|ref\|ZP_01181989.1\| Deoxynucleoside kinase [Bacillus cereus subsp. cytotoxis NVH 391-98],...	1.0E-34	[1..208]	[1..208]
gi\|88912775, gi\|... - gi\|88931496\|ref\|ZP_01137190.1\| Thymidylate kinase [Acidothermus cellulolyticus 11B], gi\|88912775\|gb\|...	2.0E-34	[4..199]	[465..665]
DGK2_LACJO - Deoxyguanosine kinase OS=Lactobacillus johnsonii GN=LJ_1825 PE=1 SV=3 DGK2_LACJO - Deoxyguanosine kinase OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) GN=LJ_1825 PE...	2.0E-34	[4..211]	[1..213]

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Predicted Domain #1

Region A:
Residues: [1-211]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGVPFITVE GPIGVGKTSL AKEISTHMQL HLLKEIVDEN PFLGKFYEDI DEWSFQTEMF  60
   61 FLCNRYKQLE DINIKYLNQR KPVVADYHIF KNVIFASRTL KDSQYDKYMQ IYRILTQDMP 120
  121 VPNVIVYLTA SLETLQRRIA MRGREFEKNM DPNYLLQLTK DYETAMDAFK KDHPDIPVLK 180
  181 FNGDDMDFVK NPDDLNVILS ALQNTLLKES K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.39794
Match:	2a2zA
Description:	Crystal Structure of human deoxycytidine kinase in complex with deoxycytidine and uridine diphosphate
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits