YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|238856809, gi...
Organism:	Enterococcus faecalis TUSoD Ef11
Length:	298 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|238856809, gi....

Description	E-value	Query Range	Subject Range
gi\|42519467, gi\|... - gi\|42519467\|ref\|NP_965397.1\| UTP--glucose-1-phosphate uridylyltransferase [Lactobacillus johnsonii N...	295.0	[0..1]	[298..1]
gi\|23002796 - gi\|23002796\|ref\|ZP_00046469.1\| COG1210: UDP-glucose pyrophosphorylase [Lactobacillus gasseri] gi\|227521298, gi... - gi\|227521298\|ref\|ZP_03951347.1\| UTP--glucose-1-phosphate uridylyltransferase [Lactobacillus gasseri ... gi\|116629360, gi... - gi\|23002796\|ref\|ZP_00046469.1\| hypothetical protein Lgas_03000721 [Lactobacillus gasseri ATCC 33323]...	291.0	[0..1]	[298..1]
gi\|227855158, gi... - gi\|227896521\|ref\|ZP_04014326.1\| UTP--glucose-1-phosphate uridylyltransferase [Lactobacillus plantaru... gi\|28377616, gi\|... - gi\|28377616\|ref\|NP_784508.1\| UTP--glucose-1-phosphate uridylyltransferase [Lactobacillus plantarum W... gi\|254555794, gi... - gi\|254555794\|ref\|YP_003062211.1\| UTP-glucose-1-phosphate uridylyltransferase [Lactobacillus plantaru...	289.0	[0..2]	[298..3]
gi\|227903507, gi... - gi\|227903507\|ref\|ZP_04021312.1\| UTP-glucose-1-phosphate uridylyltransferase [Lactobacillus acidophil... gi\|58254267, gi\|... - gi\|58336950\|ref\|YP_193535.1\| UTP-glucose-1-phosphate uridylyltransferase [Lactobacillus acidophilus ...	286.0	[0..1]	[298..1]
gi\|25010514, gi\|... - gi\|25010514\|ref\|NP_734909.1\| UTP-glucose-1-phosphate uridylyltransferase [Streptococcus agalactiae N... gi\|22536589, gi\|... - gi\|22536589\|ref\|NP_687440.1\| UTP-glucose-1-phosphate uridylyltransferase [Streptococcus agalactiae 2... gi\|76788651, gi\|... - gi\|76788651\|ref\|YP_329125.1\| UTP-glucose-1-phosphate uridylyltransferase [Streptococcus agalactiae A... gi\|77414750, gi\|... - gi\|77414750\|ref\|ZP_00790877.1\| UTP-glucose-1-phosphate uridylyltransferase [Streptococcus agalactiae... gi\|77161613, gi\|... - gi\|77412324\|ref\|ZP_00788637.1\| UTP-glucose-1-phosphate uridylyltransferase [Streptococcus agalactiae... gi\|77409739, gi\|... - gi\|77409739\|ref\|ZP_00786398.1\| UTP-glucose-1-phosphate uridylyltransferase [Streptococcus agalactiae... gi\|77174373, gi\|... - gi\|77407013\|ref\|ZP_00784025.1\| UTP-glucose-1-phosphate uridylyltransferase [Streptococcus agalactiae...	283.0	[0..1]	[295..1]
gi\|68194171, gi\|... - gi\|69249419\|ref\|ZP_00604968.1\| UTP--glucose-1-phosphate uridylyltransferase, bacterial and archaeal ... gi\|48823892 - ref\|ZP_00285355.1\| COG1210: UDP-glucose pyrophosphorylase [Enterococcus faecium]	282.0	[0..1]	[292..1]
gi\|3550619 - gi\|3550619\|emb\|CAA06172.1\| UTP-glucose-1-phosphate uridylyltransferase [Streptococcus pneumoniae]	282.0	[0..2]	[293..4]
gi\|24376696, gi\|... - gi\|24378821\|ref\|NP_720776.1\| glucose-1-phosphate uridylyltransferase [Streptococcus mutans UA159], g... gi\|3192048 - gi\|3192048\|dbj\|BAA28714.1\| glucose-1-phosphate uridylyltransferase [Streptococcus mutans]	280.0	[0..2]	[297..5]
gi\|90962242, gi\|... - gi\|90962242\|ref\|YP_536158.1\| UTP--glucose-1-phosphate uridylyltransferase [Lactobacillus salivarius ... gi\|227892345, gi... - gi\|227892345\|ref\|ZP_04010150.1\| UTP--glucose-1-phosphate uridylyltransferase [Lactobacillus salivari...	280.0	[0..1]	[289..1]

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Predicted Domain #1

Region A:
Residues: [1-298]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKKAVIPA AGLGTRFLPA TKAMAKEMLP IVDKPTIQFI VEEALASGIE DILIVTGKAK  60
   61 RPIEDHFDSN VELENNLKEK NKTDLLKLVE ETTDVNLHFI RQSHPKGLGH AVLQAKAFVG 120
  121 NEPFVVMLGD DLMEDKVPLT KQLMDDYEQT HASTIAVMKV PHEDTSKYGI INPEKEIEKG 180
  181 LYNVENFVEK PKPEEAPSDL AIIGRYLLTP EIFDVLENQK PGAGNEIQLT DAIDTLNKTQ 240
  241 RVFAREFKGE RYDVGDKFGF MKTSIEYGLT HPEVKDNLRE YIINLGAQLA KKEQPKEK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	62.221849
Match:	2ux8A
Description:	No description for 2ux8A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits