YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|254259198, gi...
Organism: Burkholderia pseudomallei 1710a
Length: 107 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|254259198, gi....

Description E-value Query
Range
Subject
Range
gi|37197683, gi|... - gi|37678941|ref|NP_933550.1| hypothetical protein VV0757 [Vibrio vulnificus YJ016], gi|37197683|dbj|...
167.0 [0..1] [107..1]

Back

Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITLTEKAA QHVQKYLTRR GKGLGLRLGV RTTGCSGLAY KLEYVDELTP EDQMFESHGV  60
   61 KVFVDPKSLA YIDGTELDFA REGLNEGFKF NNPNVKDECG CGESFRV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.30103
Match: 1s98A
Description: E.coli IscA crystal structure to 2.3 A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
2 iron, 2 sulfur cluster binding 1.80248983815833 bayes_pls_golite062009
iron-sulfur cluster binding 1.16909449675237 bayes_pls_golite062009
metal cluster binding 1.16909449675237 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle