YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|124301164, gi...
Organism:	Arabidopsis thaliana
Length:	322 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|124301164, gi....

Description	E-value	Query Range	Subject Range
gi\|15208400 - gi\|15208400\|dbj\|BAB63207.1\| 3(20)alpha-hydroxysteroid/dihydrodiol/indanol dehydrogenase [Macaca fusc... AK1C1_MACFU - Aldo-keto reductase family 1 member C1 homolog OS=Macaca fuscata fuscata GN=AKR1C1 PE=2 SV=1 gi\|109088079, gi... - gi\|109088083\|ref\|XP_001103887.1\| PREDICTED: aldo-keto reductase family 1, member C1 isoform 5 [Macac...	339.0	[0..9]	[312..1]

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Predicted Domain #1

Region A:
Residues: [1-322]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHATFTSEG QNMESFRLLS GHKIPAVGLG TWRSGSQAAH AVVTAIVEGG YRHIDTAWEY  60
   61 GDQREVGQGI KRAMHAGLER RDLFVTSKLW CTELSPERVR PALQNTLKEL QLEYLDLYLI 120
  121 HWPIRLREGA SKPPKAGDVL DFDMEGVWRE MENLSKDSLV RNIGVCNFTV TKLNKLLGFA 180
  181 ELIPAVCQME MHPGWRNDRI LEFCKKNEIH VTAYSPLGSQ EGGRDLIHDQ TVDRIAKKLN 240
  241 KTPGQILVKW GLQRGTSVIP KSLNPERIKE NIKVFDWVIP EQDFQALNSI TDQKRVIDGE 300
  301 DLFVNKTEGP FRSVADLWDH ED

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	88.09691
Match:	2bgqA
Description:	No description for 2bgqA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits