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View Structure Prediction Details

Protein: RHON1_ARATH
Organism: Arabidopsis thaliana
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RHON1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21536878 - gi|21536878|gb|AAM61210.1| unknown [Arabidopsis thaliana]
485.0 [0..1] [401..1]
gi|50920397, gi|... - gi|50920397|ref|XP_470559.1| Putative plasma membrane proton ATPase [Oryza sativa], gi|15217290|gb|...
326.0 [0..55] [392..68]
IGA4_HAEIF - Immunoglobulin A1 protease autotransporter OS=Haemophilus influenzae GN=iga PE=3 SV=1
222.0 [0..89] [366..1087]
dpy-22 - status:Partially_confirmed UniProt:Q20497 protein_id:CAA90064.1
186.0 [0..158] [392..541]
gi|63100382 - gi|63100382|gb|AAH94511.1| Fam160a1 protein [Mus musculus]
179.0 [0..154] [355..475]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMSGTFHLT SDYVPGYTLS DSRCFFNSAV SRRTLAILPC SSCLDHKNGR LKSVPNRSSF  60
   61 VCRASSGGYR RNPDFSRLNK H

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYRGNNRQSG GREDFDIENS DMLSSRNGPL FNLSSSPKFQ ATSSPGPREK EIVELFRKVQ  60
   61 AQLRARAAAK KEEKKIEEAS KGQGKESETV DSLLKLLRKH SGEQSKRQVS KFSSQGEVQG 120
  121 DTVDKQDRTG NLVTSGNKDN NASSFTRPTS SFRRKSPVPR SQSPPAYSSE ATFDQSSSYS 180
  181 VTWTQK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [268-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDTVELHDEP EHEPAYEHEH EPENESEPGP VTTMLEPDSE LKPESSSFYQ EEEDDDVTFD  60
   61 VLSQDDGILD VLSDDDESLD DADEDSDEAE EEAVKDLSEL KLVELRGIAK SRGLKGLSKM 120
  121 KKAELVELLG SDSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle