| Protein: | TGD1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 350 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TGD1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
300.0 | [0..68] | [350..1] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MMQTCCIHQS FCFPHRVFPR FDASIGIKPP KLCQVGFIGK TQSYGISSPI RQRRLYVNLN 60
61 ANDGHPSMSM LEEETSTENN APSQEA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.321 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.268 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.234 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.234 | a.74.1 | Cyclin-like |
| View | Download | 0.207 | d.58.7 | RNA-binding domain, RBD |
|
Region A: Residues: [87-225] |
1 11 21 31 41 51
| | | | | |
1 ELPFSKWSPS KYIWRGLSVP IIAGQVVLRI LKGKIHWRNT LQQLERTGPK SLGVCLLTST 60
61 FVGMAFTIQF VREFTRLGLN RSIGGVLALA FSRELSPVIT SIVVAGRMGS AFAAELGTMQ 120
121 VSEQTDTLRV LGADPIDYL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [226-350] |
1 11 21 31 41 51
| | | | | |
1 ITPRVIASCL ALPFLTLMCF TVGMASSALL SDAVYGISIN IIMDSAHRAL RPWDIVSAMI 60
61 KSQVFGAIIS VISCSWGVTT TGGAKGVGES TTSAVVMSLV GIFIADFVLS SFFFQGAGDS 120
121 LKNCV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
