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View Structure Prediction Details

Protein: NUD20_ARATH
Organism: Arabidopsis thaliana
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUD20_ARATH.

Description E-value Query
Range
Subject
Range
NUD24_ARATH - Nudix hydrolase 24, chloroplastic OS=Arabidopsis thaliana GN=NUDT24 PE=2 SV=1
282.0 [0..1] [374..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGFCSLAL TVTTSLFSSH AITRRVLPIL RWRSSSMSLS PLRHSRALSA ATTVPISSSF  60
   61 TWDDVIETGR AEYNSSDLTG FFEKINRCNR GSEKLGEFIP FVIEEQIVGY IHKRFTEYLR 120
  121 EFHDIFTFSQ NGSCPDR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDGYVTLNLM LQKPEDRTRA VADVIKILGD KGIIPGIRNE LYPVKPSFNA PVFFSLERAA  60
   61 APYFGIKGYG VHMNGYVERD GQKLLWIGKR SLSKSTYPGM LDHLVAGGLP HGISCGGNLV 120
  121 KECEEEAGIS RAIADRAIAV GAVSYLDIDQ YCFKRDVLFC YDLELPEDFV PKNQDGEVES 180
  181 FKLIPVAQVA SVIKKTSFFK ANCSLVIIDF LFRHGFIRPE SSGYLDLYQR LRNRDCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.69897
Match: 2pnyA
Description: No description for 2pnyA was found.

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