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View Structure Prediction Details

Protein: gi|22655008, gi|...
Organism: Arabidopsis thaliana
Length: 452 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22655008, gi|....

Description E-value Query
Range
Subject
Range
gi|9294547 - gi|9294547|dbj|BAB02810.1| unnamed protein product [Arabidopsis thaliana]
730.0 [0..1] [452..1]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADIDIGTAA TTGGNEGRGG TRERLINREN KFTRSVSHAQ DELHSFRKYL RWMCVDQSSP  60
   61 WTAVLSWSMF VVFTLVVPAT SHFMLACSDC D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHHSRPYDSV VQLSLSSFAA LSFLCLSRFV SKYGLRRFLF FDKLWDESET VRLGYTNQLN  60
   61 RSLKILSYFV SPCFLAMSSY KIWWYASGAS QIPFLGNVIL SDTVACLMEL CSWLYRTTVI 120
  121 FLVCVLFRLI CHLQILRLQD FAQVFQMDSD VGSILSEHLR IRRHLRIISH RYRTFILLSL 180
  181 ILVTGSQFYS LLITTKAYA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [291-452]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELNIYRAGEL ALCSMTLVTA LLILLRSASK ITHKAQAVTC LAAKWHVCAT IESFETVDGE  60
   61 TPRLVDRASG HGYYPTDDDN GESDSEDYGD EEDDFDNNNL IPAYAYSTIS FQKRQALVNY 120
  121 FENNRSGITV FGFTLDRSTL HTIFGIEMSL VLWLLGKTIG IS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle