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View Structure Prediction Details

Protein: PSB28_ARATH
Organism: Arabidopsis thaliana
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSB28_ARATH.

Description E-value Query
Range
Subject
Range
gi|7269721, gi|7... - pir||T10660 photosystem II protein W homolog T5F17.110 - Arabidopsis thaliana, gi|7269721|emb|CAB814...
330.0 [0..1] [183..42]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACVRSIGSL TSVNHSQRNV PRSGIVLSSC SVLPIKSSSF TGSPVSLPRA QPSSRTALRP  60
   61 MKPVSITMMV KPALQFIQGT DEMTIPDVKL TRSRDGSNGM ALFSFDQPSV FDSSGEVGEI 120
  121 TGLYMIDEEG VIQSTDVNAR FVNGKPEGIV AKHIMRSPKE WDRFMRFMER YSDQNGLQFV 180
  181 KKQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 65.920819
Match: PF03912.5
Description: No description for PF03912.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle