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View Structure Prediction Details

Protein: B3GT4_ARATH
Organism: Arabidopsis thaliana
Length: 407 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B3GT4_ARATH.

Description E-value Query
Range
Subject
Range
gi|7485336, gi|7... - pir||T04817 hypothetical protein F10M23.280 - Arabidopsis thaliana, gi|7269547|emb|CAB79549.1| Avr9 ...
337.0 [0..1] [407..1]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKHHHRGL ELSASKSFVS KKWTLFLCIG FFCAGILFSD RMWPEPESNV VSRDTVASDE  60
   61 RLRLESEDCD SSKKGLKRES KDILGDVYKS PDAIQTLDKT ISKLETELAD ARAAQESIMN 120
  121 GSPVSDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [128-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FKLPETVTKR KYLMVVGVNT AFSSRKRRDS VRATWMPPGE ERKKLEEEKG IVMRFVIGHS  60
   61 STPGGILDRA IQAEESKHGD FLRLDHVEGY LELSAKTKTY FTTAFAMWDA DFYVKVDDDV 120
  121 HVNIATLGAE LARYRMKPRV YIGCMKSGPV LAQKGVRYHE PEYWKFGEEG NKYFRHATGQ 180
  181 LYAISRELAS YISINQNVLH KYVNEDVSLG SWFLGLDVEH VDDRRLCCGT TDCEWKAQAG 240
  241 NICVASFDWS CSGICRSADR MKDVHRRCGE GEKALLAASF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle